Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 UBTFL9-201ENST00000534504 1148 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AL352979.3-201ENST00000553515 247 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 AC124068.1-201ENST00000563131 678 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 MIR4458-201ENST00000578872 75 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.82□□□□□ -1.8
CX3CR1P49238 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.82□□□□□ -1.8
CX3CR1P49238 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.82□□□□□ -1.8
CX3CR1P49238 AP001160.4-201ENST00000596971 382 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AC093765.1-201ENST00000603758 881 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AC004948.1-201ENST00000609858 672 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.82□□□□□ -1.8
CX3CR1P49238 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 AC002044.3-201ENST00000623314 541 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AP001784.1-201ENST00000624107 428 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 CR392039.4-201ENST00000624968 501 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CX3CR1P49238 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.82□□□□□ -1.8
CX3CR1P49238 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CR1P49238 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CR1P49238 MTCO1P8-201ENST00000416914 1523 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CR1P49238 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CX3CR1P49238 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CR1P49238 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
CX3CR1P49238 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CX3CR1P49238 RNU6-452P-201ENST00000384406 107 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 MIR3065-201ENST00000390137 79 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 MIR708-201ENST00000390708 88 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CR1P49238 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CR1P49238 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CR1P49238 AC244453.4-201ENST00000419150 388 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CR1P49238 RPS24P8-201ENST00000431490 402 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.81□□□□□ -1.8
CX3CR1P49238 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CR1P49238 AC073264.2-201ENST00000448886 166 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 ABCF2P2-201ENST00000450549 296 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 MTND2P8-201ENST00000450555 1025 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 TPMTP4-201ENST00000450749 678 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 HMGB1P5-202ENST00000451497 985 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 RPL35AP15-201ENST00000468042 339 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 RPL21P126-201ENST00000470049 478 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 RPL23AP2-201ENST00000471227 466 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CR1P49238 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CR1P49238 AC107398.1-201ENST00000486904 505 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.81□□□□□ -1.8
CX3CR1P49238 RNU6-889P-201ENST00000517189 103 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CR1P49238 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CR1P49238 AP000827.1-201ENST00000527814 258 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CR1P49238 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.81□□□□□ -1.8
CX3CR1P49238 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CR1P49238 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.81□□□□□ -1.8
CX3CR1P49238 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.81□□□□□ -1.8
CX3CR1P49238 OR4U1P-201ENST00000554958 912 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 AC106785.3-201ENST00000564064 847 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 NF1P5-201ENST00000588287 448 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CR1P49238 AL133247.2-201ENST00000603236 482 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 AC008782.1-201ENST00000603386 430 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CX3CR1P49238 AP004607.9-201ENST00000618202 316 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 AC067931.1-201ENST00000624190 671 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 FP325313.1-201ENST00000638228 703 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
CX3CR1P49238 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CR1P49238 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CX3CR1P49238 AL592148.3-201ENST00000608771 2646 ntBASIC3.81□□□□□ -1.8
CX3CR1P49238 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CX3CR1P49238 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CX3CR1P49238 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CR1P49238 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CR1P49238 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CX3CR1P49238 OR4K15-201ENST00000305051 1216 ntBASIC3.8□□□□□ -1.8
CX3CR1P49238 IGKV7-3-201ENST00000357453 298 ntBASIC3.8□□□□□ -1.8
CX3CR1P49238 RNU1-130P-201ENST00000363930 160 ntBASIC3.8□□□□□ -1.8
CX3CR1P49238 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.8□□□□□ -1.8
CX3CR1P49238 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CX3CR1P49238 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.8□□□□□ -1.8
CX3CR1P49238 RNA5SP39-201ENST00000411245 120 ntBASIC3.8□□□□□ -1.8
CX3CR1P49238 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CR1P49238 YWHAEP5-201ENST00000431545 765 ntBASIC3.8□□□□□ -1.8
CX3CR1P49238 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CR1P49238 ELOCP8-201ENST00000439309 332 ntBASIC3.8□□□□□ -1.8
CX3CR1P49238 ELOCP15-201ENST00000442090 332 ntBASIC3.8□□□□□ -1.8
CX3CR1P49238 RPL34P26-201ENST00000445636 354 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms