Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC015722.2-201ENST00000622210 551 ntBASIC4.39□□□□□ -1.71
TNFSF9P41273 AC008785.1-201ENST00000624475 456 ntBASIC4.39□□□□□ -1.71
TNFSF9P41273 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TNFSF9P41273 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TNFSF9P41273 MAPK10-349ENST00000641767 3661 ntBASIC4.39□□□□□ -1.71
TNFSF9P41273 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TNFSF9P41273 AC104118.1-201ENST00000607625 1589 ntBASIC4.39□□□□□ -1.71
TNFSF9P41273 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
TNFSF9P41273 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TNFSF9P41273 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TNFSF9P41273 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFSF9P41273 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TNFSF9P41273 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFSF9P41273 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFSF9P41273 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TNFSF9P41273 SNORA60-201ENST00000362396 134 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.38□□□□□ -1.71
TNFSF9P41273 DYNLL1P7-201ENST00000429273 258 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 AC022022.1-201ENST00000430304 178 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.38□□□□□ -1.71
TNFSF9P41273 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.38□□□□□ -1.71
TNFSF9P41273 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.38□□□□□ -1.71
TNFSF9P41273 AL359073.1-201ENST00000448036 403 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.38□□□□□ -1.71
TNFSF9P41273 TPT1P3-201ENST00000492841 512 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.38□□□□□ -1.71
TNFSF9P41273 ARL4AP1-201ENST00000503220 705 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 SLC25A15P5-201ENST00000508033 253 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 IFITM8P-201ENST00000522529 394 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TNFSF9P41273 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.38□□□□□ -1.71
TNFSF9P41273 AC084759.1-201ENST00000561168 290 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.38□□□□□ -1.71
TNFSF9P41273 AC093227.2-201ENST00000589357 285 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.38□□□□□ -1.71
TNFSF9P41273 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.38□□□□□ -1.71
TNFSF9P41273 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TNFSF9P41273 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.38□□□□□ -1.71
TNFSF9P41273 ASNSP1-204ENST00000641977 1664 ntBASIC4.38□□□□□ -1.71
TNFSF9P41273 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFSF9P41273 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFSF9P41273 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TNFSF9P41273 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.38□□□□□ -1.71
TNFSF9P41273 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF9P41273 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF9P41273 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF9P41273 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF9P41273 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.37□□□□□ -1.71
TNFSF9P41273 LINC01355-201ENST00000566551 5444 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF9P41273 RN7SKP280-201ENST00000364196 304 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TNFSF9P41273 RPL32P23-201ENST00000397237 405 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFSF9P41273 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.37□□□□□ -1.71
TNFSF9P41273 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFSF9P41273 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF9P41273 AP000936.3-201ENST00000438127 255 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFSF9P41273 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFSF9P41273 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFSF9P41273 AC092691.2-201ENST00000461787 803 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFSF9P41273 RPL21P6-201ENST00000479171 504 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 RFPL4AP5-201ENST00000514977 504 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFSF9P41273 AC025857.1-201ENST00000525252 377 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.37□□□□□ -1.71
TNFSF9P41273 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.37□□□□□ -1.71
TNFSF9P41273 AC034105.4-201ENST00000568304 277 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 RN7SL703P-201ENST00000578485 302 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 AC022916.3-201ENST00000592961 742 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.37□□□□□ -1.71
TNFSF9P41273 MIR6500-201ENST00000622700 86 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.37□□□□□ -1.71
TNFSF9P41273 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.37□□□□□ -1.71
TNFSF9P41273 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.37□□□□□ -1.71
TNFSF9P41273 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TNFSF9P41273 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TNFSF9P41273 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF9P41273 HSPD1P11-201ENST00000508643 1702 ntBASIC4.37□□□□□ -1.71
TNFSF9P41273 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TNFSF9P41273 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFSF9P41273 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFSF9P41273 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TNFSF9P41273 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.37□□□□□ -1.71
TNFSF9P41273 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFSF9P41273 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TNFSF9P41273 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TNFSF9P41273 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFSF9P41273 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.36□□□□□ -1.71
TNFSF9P41273 RNA5SP399-201ENST00000364003 117 ntBASIC4.36□□□□□ -1.71
TNFSF9P41273 CASKP1-201ENST00000412870 582 ntBASIC4.36□□□□□ -1.71
TNFSF9P41273 OR8F1P-201ENST00000425243 930 ntBASIC4.36□□□□□ -1.71
TNFSF9P41273 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.36□□□□□ -1.71
TNFSF9P41273 PTMAP3-201ENST00000447474 330 ntBASIC4.36□□□□□ -1.71
TNFSF9P41273 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFSF9P41273 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms