Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC011472.4-201ENST00000615848 491 ntBASIC5.23□□□□□ -1.57
CIITAP33076 MIR8069-1-201ENST00000616627 86 ntBASIC5.23□□□□□ -1.57
CIITAP33076 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.23□□□□□ -1.57
CIITAP33076 MIR8069-2-201ENST00000621412 86 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AC009039.2-201ENST00000624524 529 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AP000676.4-201ENST00000624659 623 ntBASIC5.23□□□□□ -1.57
CIITAP33076 Z98755.1-201ENST00000407015 1384 ntBASIC5.23□□□□□ -1.57
CIITAP33076 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CIITAP33076 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CIITAP33076 AL136164.3-201ENST00000624429 3978 ntBASIC5.23□□□□□ -1.57
CIITAP33076 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.23□□□□□ -1.57
CIITAP33076 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CIITAP33076 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.22□□□□□ -1.57
CIITAP33076 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CIITAP33076 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.22□□□□□ -1.57
CIITAP33076 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 RNU6-532P-201ENST00000384318 107 ntBASIC5.22□□□□□ -1.57
CIITAP33076 RNA5SP332-201ENST00000391063 115 ntBASIC5.22□□□□□ -1.57
CIITAP33076 ATF1P1-201ENST00000406040 927 ntBASIC5.22□□□□□ -1.57
CIITAP33076 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.22□□□□□ -1.57
CIITAP33076 RNU2-17P-201ENST00000410290 190 ntBASIC5.22□□□□□ -1.57
CIITAP33076 RN7SKP222-201ENST00000410651 315 ntBASIC5.22□□□□□ -1.57
CIITAP33076 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.22□□□□□ -1.57
CIITAP33076 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.22□□□□□ -1.57
CIITAP33076 AC009302.1-201ENST00000417147 390 ntBASIC5.22□□□□□ -1.57
CIITAP33076 MTND2P16-201ENST00000419987 799 ntBASIC5.22□□□□□ -1.57
CIITAP33076 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.22□□□□□ -1.57
CIITAP33076 XKRYP1-201ENST00000423438 492 ntBASIC5.22□□□□□ -1.57
CIITAP33076 PNRC2P1-201ENST00000423940 420 ntBASIC5.22□□□□□ -1.57
CIITAP33076 NANOGP5-201ENST00000424456 877 ntBASIC5.22□□□□□ -1.57
CIITAP33076 DEFB130D-201ENST00000426866 237 ntBASIC5.22□□□□□ -1.57
CIITAP33076 RPL23AP1-201ENST00000428990 471 ntBASIC5.22□□□□□ -1.57
CIITAP33076 XKRYP2-201ENST00000432915 492 ntBASIC5.22□□□□□ -1.57
CIITAP33076 OR10R1P-201ENST00000441524 1141 ntBASIC5.22□□□□□ -1.57
CIITAP33076 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.22□□□□□ -1.57
CIITAP33076 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.22□□□□□ -1.57
CIITAP33076 AL162591.2-201ENST00000449634 317 ntBASIC5.22□□□□□ -1.57
CIITAP33076 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.22□□□□□ -1.57
CIITAP33076 SNORD11.1-201ENST00000459482 85 ntBASIC5.22□□□□□ -1.57
CIITAP33076 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.22□□□□□ -1.57
CIITAP33076 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.22□□□□□ -1.57
CIITAP33076 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.22□□□□□ -1.57
CIITAP33076 CDH12P2-201ENST00000504393 298 ntBASIC5.22□□□□□ -1.57
CIITAP33076 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 RNA5SP228-201ENST00000516232 133 ntBASIC5.22□□□□□ -1.57
CIITAP33076 AP000827.1-201ENST00000527814 258 ntBASIC5.22□□□□□ -1.57
CIITAP33076 AC023538.1-201ENST00000534576 736 ntBASIC5.22□□□□□ -1.57
CIITAP33076 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.22□□□□□ -1.57
CIITAP33076 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.22□□□□□ -1.57
CIITAP33076 CR383656.6-201ENST00000550518 394 ntBASIC5.22□□□□□ -1.57
CIITAP33076 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 AP005119.2-201ENST00000579735 1105 ntBASIC5.22□□□□□ -1.57
CIITAP33076 RN7SL435P-201ENST00000584418 282 ntBASIC5.22□□□□□ -1.57
CIITAP33076 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.22□□□□□ -1.57
CIITAP33076 AL365400.2-201ENST00000605604 902 ntBASIC5.22□□□□□ -1.57
CIITAP33076 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 AL355493.4-201ENST00000618530 292 ntBASIC5.22□□□□□ -1.57
CIITAP33076 AC006386.1-201ENST00000619436 415 ntBASIC5.22□□□□□ -1.57
CIITAP33076 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CIITAP33076 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CIITAP33076 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.22□□□□□ -1.57
CIITAP33076 AL592148.3-201ENST00000608771 2646 ntBASIC5.22□□□□□ -1.57
CIITAP33076 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.22□□□□□ -1.57
CIITAP33076 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CIITAP33076 AC108751.5-201ENST00000492880 1336 ntBASIC5.22□□□□□ -1.57
CIITAP33076 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.21□□□□□ -1.57
CIITAP33076 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.21□□□□□ -1.57
CIITAP33076 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CIITAP33076 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CIITAP33076 OR56B2P-202ENST00000641377 2453 ntBASIC5.21□□□□□ -1.57
CIITAP33076 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
CIITAP33076 SNORA56-201ENST00000383966 129 ntBASIC5.21□□□□□ -1.58
CIITAP33076 MIR129-1-201ENST00000384972 72 ntBASIC5.21□□□□□ -1.58
CIITAP33076 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.21□□□□□ -1.58
CIITAP33076 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.21□□□□□ -1.58
CIITAP33076 AC069213.2-201ENST00000420238 366 ntBASIC5.21□□□□□ -1.58
CIITAP33076 RPS27AP7-201ENST00000422792 455 ntBASIC5.21□□□□□ -1.58
CIITAP33076 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.21□□□□□ -1.58
CIITAP33076 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.21□□□□□ -1.58
CIITAP33076 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.21□□□□□ -1.58
CIITAP33076 AC000041.1-201ENST00000439655 175 ntBASIC5.21□□□□□ -1.58
CIITAP33076 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.21□□□□□ -1.58
CIITAP33076 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.21□□□□□ -1.58
CIITAP33076 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.21□□□□□ -1.58
CIITAP33076 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.21□□□□□ -1.58
CIITAP33076 RN7SL738P-201ENST00000470264 297 ntBASIC5.21□□□□□ -1.58
CIITAP33076 RPL21P6-201ENST00000479171 504 ntBASIC5.21□□□□□ -1.58
CIITAP33076 RN7SL809P-201ENST00000482040 297 ntBASIC5.21□□□□□ -1.58
CIITAP33076 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CIITAP33076 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CIITAP33076 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.21□□□□□ -1.58
CIITAP33076 AC010627.1-201ENST00000503819 1294 ntBASIC5.21□□□□□ -1.58
CIITAP33076 BOLA3P3-201ENST00000505182 232 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms