Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CASQ1P31415 MFSD8-242ENST00000641690 4199 ntBASIC4.54□□□□□ -1.68
CASQ1P31415 INTS6P1-201ENST00000504674 2530 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 ERCC6-202ENST00000374127 1782 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CASQ1P31415 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.53□□□□□ -1.68
CASQ1P31415 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CASQ1P31415 AC099535.1-201ENST00000408928 371 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 RN7SKP273-201ENST00000411392 314 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.53□□□□□ -1.68
CASQ1P31415 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.53□□□□□ -1.68
CASQ1P31415 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.53□□□□□ -1.68
CASQ1P31415 RPL24P2-201ENST00000421023 475 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.53□□□□□ -1.68
CASQ1P31415 MTCO1P54-201ENST00000430139 712 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 AC087650.1-201ENST00000431445 468 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.53□□□□□ -1.68
CASQ1P31415 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.53□□□□□ -1.68
CASQ1P31415 YWHAQP9-201ENST00000445891 512 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.53□□□□□ -1.68
CASQ1P31415 TMED11P-201ENST00000479478 690 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 RN7SL741P-201ENST00000482473 289 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 BNIP3P41-201ENST00000503774 571 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.53□□□□□ -1.68
CASQ1P31415 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.53□□□□□ -1.68
CASQ1P31415 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.53□□□□□ -1.68
CASQ1P31415 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.53□□□□□ -1.68
CASQ1P31415 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.53□□□□□ -1.68
CASQ1P31415 AC006270.2-201ENST00000578523 652 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 AL512782.1-201ENST00000603093 364 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 AC015982.1-201ENST00000608113 465 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.53□□□□□ -1.68
CASQ1P31415 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.53□□□□□ -1.68
CASQ1P31415 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.53□□□□□ -1.68
CASQ1P31415 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.53□□□□□ -1.68
CASQ1P31415 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CASQ1P31415 TNPO1P3-201ENST00000436471 2662 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CASQ1P31415 AC025031.4-201ENST00000621248 3271 ntBASIC4.53□□□□□ -1.68
CASQ1P31415 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CASQ1P31415 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CASQ1P31415 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
CASQ1P31415 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CASQ1P31415 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASQ1P31415 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASQ1P31415 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CASQ1P31415 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASQ1P31415 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CASQ1P31415 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CASQ1P31415 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.52□□□□□ -1.69
CASQ1P31415 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.52□□□□□ -1.69
CASQ1P31415 RPA2P2-201ENST00000419698 796 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 USP12PY-201ENST00000427677 1064 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.52□□□□□ -1.69
CASQ1P31415 AL138799.3-201ENST00000438968 350 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 AL353898.1-201ENST00000444055 238 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 AC063943.1-201ENST00000465434 453 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 AC092451.1-201ENST00000480211 153 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.52□□□□□ -1.69
CASQ1P31415 RPL31P61-201ENST00000496160 376 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 AC006499.3-201ENST00000506077 748 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.52□□□□□ -1.69
CASQ1P31415 MTCO1P30-201ENST00000515244 580 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CASQ1P31415 OR4U1P-201ENST00000554958 912 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.52□□□□□ -1.69
CASQ1P31415 AC007599.1-201ENST00000568688 1174 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CASQ1P31415 AC079587.1-201ENST00000603846 277 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 Z82195.1-201ENST00000604558 398 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.52□□□□□ -1.69
CASQ1P31415 MIR6778-201ENST00000617912 73 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 AP002799.1-201ENST00000623552 423 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.52□□□□□ -1.69
CASQ1P31415 BRAFP1-201ENST00000445336 2703 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 AC010928.1-201ENST00000592477 1447 ntBASIC4.52□□□□□ -1.69
CASQ1P31415 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASQ1P31415 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASQ1P31415 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.52□□□□□ -1.69
CASQ1P31415 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.52□□□□□ -1.69
CASQ1P31415 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CASQ1P31415 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CASQ1P31415 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.51□□□□□ -1.69
CASQ1P31415 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CASQ1P31415 RN7SKP100-201ENST00000411258 284 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.51□□□□□ -1.69
CASQ1P31415 AL159169.1-201ENST00000421119 127 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 RBMY2QP-201ENST00000429799 1147 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.51□□□□□ -1.69
CASQ1P31415 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.51□□□□□ -1.69
CASQ1P31415 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CASQ1P31415 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.51□□□□□ -1.69
CASQ1P31415 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.51□□□□□ -1.69
CASQ1P31415 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.51□□□□□ -1.69
CASQ1P31415 AL157884.3-201ENST00000448273 1184 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.51□□□□□ -1.69
CASQ1P31415 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms