Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL4A5P29400 HSPD1P11-201ENST00000508643 1702 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.62□□□□□ -1.67
COL4A5P29400 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.62□□□□□ -1.67
COL4A5P29400 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL4A5P29400 AC005831.1-201ENST00000624384 1697 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.61□□□□□ -1.67
COL4A5P29400 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 OR4K6P-201ENST00000416478 897 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.61□□□□□ -1.67
COL4A5P29400 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.61□□□□□ -1.67
COL4A5P29400 RAC1P2-201ENST00000511164 579 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 RNA5SP208-201ENST00000516156 78 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 AC100770.1-201ENST00000532310 322 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 LSM3P2-201ENST00000551246 273 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A5P29400 AC023509.5-201ENST00000617434 807 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 AC244258.1-201ENST00000637553 1071 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
COL4A5P29400 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.61□□□□□ -1.67
COL4A5P29400 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.61□□□□□ -1.67
COL4A5P29400 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
COL4A5P29400 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 SNORD9-201ENST00000362566 104 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 MIR195-201ENST00000385194 87 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 ZNF602P-201ENST00000405929 924 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 VN1R8P-201ENST00000407739 893 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 AC073335.1-201ENST00000427776 363 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A5P29400 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.61□□□□□ -1.67
COL4A5P29400 AL591503.2-201ENST00000442314 1005 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A5P29400 CYCSP35-201ENST00000451978 304 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A5P29400 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.61□□□□□ -1.67
COL4A5P29400 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.61□□□□□ -1.67
COL4A5P29400 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.61□□□□□ -1.67
COL4A5P29400 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A5P29400 SLC25A36P1-201ENST00000590111 465 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 AC104662.1-201ENST00000604448 511 ntBASIC4.61□□□□□ -1.67
COL4A5P29400 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A5P29400 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A5P29400 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A5P29400 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.6□□□□□ -1.67
COL4A5P29400 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A5P29400 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A5P29400 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
COL4A5P29400 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A5P29400 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A5P29400 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
COL4A5P29400 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.6□□□□□ -1.67
COL4A5P29400 AC017083.1-201ENST00000428093 483 ntBASIC4.6□□□□□ -1.67
COL4A5P29400 RPL21P110-201ENST00000433345 446 ntBASIC4.6□□□□□ -1.67
COL4A5P29400 AC006517.1-201ENST00000480485 328 ntBASIC4.6□□□□□ -1.67
COL4A5P29400 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.6□□□□□ -1.67
COL4A5P29400 IGLV3-26-201ENST00000520756 302 ntBASIC4.6□□□□□ -1.67
COL4A5P29400 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.6□□□□□ -1.67
COL4A5P29400 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.6□□□□□ -1.67
COL4A5P29400 AC068993.1-201ENST00000546724 589 ntBASIC4.6□□□□□ -1.67
COL4A5P29400 GTF2IP8-201ENST00000560687 584 ntBASIC4.6□□□□□ -1.67
COL4A5P29400 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.6□□□□□ -1.67
COL4A5P29400 AC010503.3-201ENST00000594355 540 ntBASIC4.6□□□□□ -1.67
COL4A5P29400 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.6□□□□□ -1.67
COL4A5P29400 AC011816.2-201ENST00000607089 556 ntBASIC4.6□□□□□ -1.67
COL4A5P29400 AL513477.2-201ENST00000607858 568 ntBASIC4.6□□□□□ -1.67
COL4A5P29400 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.6□□□□□ -1.67
COL4A5P29400 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
COL4A5P29400 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A5P29400 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.59□□□□□ -1.67
COL4A5P29400 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A5P29400 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A5P29400 Z95327.2-201ENST00000414579 1873 ntBASIC4.59□□□□□ -1.67
COL4A5P29400 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A5P29400 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.59□□□□□ -1.67
COL4A5P29400 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.59□□□□□ -1.67
COL4A5P29400 AL390879.2-203ENST00000426943 1121 ntBASIC4.59□□□□□ -1.67
COL4A5P29400 AC005326.1-201ENST00000429197 123 ntBASIC4.59□□□□□ -1.67
COL4A5P29400 AC104849.1-201ENST00000462623 405 ntBASIC4.59□□□□□ -1.67
COL4A5P29400 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.59□□□□□ -1.67
COL4A5P29400 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.59□□□□□ -1.67
COL4A5P29400 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.59□□□□□ -1.67
COL4A5P29400 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.59□□□□□ -1.67
COL4A5P29400 RN7SL371P-201ENST00000578099 267 ntBASIC4.59□□□□□ -1.67
COL4A5P29400 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.59□□□□□ -1.67
COL4A5P29400 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A5P29400 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A5P29400 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A5P29400 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL4A5P29400 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
COL4A5P29400 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms