Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN4P29074 TPRKBP1-201ENST00000456243 481 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 AC025164.1-201ENST00000496249 478 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 SNORD116-26-201ENST00000516006 96 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.49□□□□□ -1.69
PTPN4P29074 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN4P29074 HMGB1P46-201ENST00000520062 610 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN4P29074 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN4P29074 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN4P29074 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN4P29074 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN4P29074 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN4P29074 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.49□□□□□ -1.69
PTPN4P29074 MTCO3P22-201ENST00000603219 784 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN4P29074 AC123768.4-201ENST00000616244 701 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN4P29074 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN4P29074 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN4P29074 Z73965.1-201ENST00000623412 2297 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN4P29074 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN4P29074 AL442639.1-201ENST00000625030 1899 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PTPN4P29074 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN4P29074 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PTPN4P29074 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PTPN4P29074 ZFRP1-201ENST00000457579 2970 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PTPN4P29074 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN4P29074 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN4P29074 SNORD115-48-201ENST00000364764 76 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN4P29074 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN4P29074 AC013404.1-201ENST00000413068 249 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN4P29074 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.48□□□□□ -1.69
PTPN4P29074 RPL23AP1-201ENST00000428990 471 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 RPL23AP25-201ENST00000430973 463 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN4P29074 ELOCP18-201ENST00000434209 337 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN4P29074 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN4P29074 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN4P29074 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN4P29074 AC079804.1-201ENST00000461922 436 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN4P29074 AC139783.2-201ENST00000504847 1145 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 AC091868.1-201ENST00000508746 304 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 PARP4P3-201ENST00000510265 317 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN4P29074 VTA1P2-201ENST00000520205 911 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN4P29074 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN4P29074 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN4P29074 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN4P29074 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN4P29074 MIR4277-201ENST00000578298 84 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN4P29074 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN4P29074 AC010201.1-201ENST00000605051 540 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN4P29074 AL121873.1-201ENST00000616013 524 ntBASIC4.48□□□□□ -1.69
PTPN4P29074 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PTPN4P29074 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPN4P29074 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PTPN4P29074 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PTPN4P29074 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN4P29074 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN4P29074 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
PTPN4P29074 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN4P29074 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN4P29074 AC097504.1-201ENST00000515103 2415 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN4P29074 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN4P29074 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN4P29074 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PTPN4P29074 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN4P29074 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN4P29074 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN4P29074 GCNT6-201ENST00000379591 934 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 MIR129-1-201ENST00000384972 72 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 RNA5SP397-201ENST00000391323 118 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 OR1F12-201ENST00000402365 945 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 RN7SKP267-201ENST00000410381 285 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 AL645608.4-201ENST00000423619 154 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 SEC63P1-201ENST00000425785 1258 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN4P29074 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN4P29074 BTBD7P2-201ENST00000441962 620 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 AL162388.1-201ENST00000450912 352 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN4P29074 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN4P29074 MTND2P28-201ENST00000457540 1044 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 AC026979.1-201ENST00000492525 396 ntBASIC4.47□□□□□ -1.69
PTPN4P29074 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.47□□□□□ -1.69
PTPN4P29074 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms