Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.71□□□□□ -1.66
ABCD3P28288 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.71□□□□□ -1.66
ABCD3P28288 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCD3P28288 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ABCD3P28288 AC016180.1-201ENST00000567945 403 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 MIR3912-201ENST00000577566 105 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCD3P28288 VN1R83P-201ENST00000595685 445 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ABCD3P28288 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ABCD3P28288 RNU6-156P-201ENST00000621869 107 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 MIR6719-201ENST00000622428 87 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.71□□□□□ -1.66
ABCD3P28288 AC021242.1-201ENST00000507315 2035 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ABCD3P28288 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.71□□□□□ -1.66
ABCD3P28288 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ABCD3P28288 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ABCD3P28288 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
ABCD3P28288 AL139811.1-201ENST00000424779 2299 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 THAP12P4-201ENST00000528321 2266 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
ABCD3P28288 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.71□□□□□ -1.66
ABCD3P28288 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
ABCD3P28288 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
ABCD3P28288 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.7□□□□□ -1.66
ABCD3P28288 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
ABCD3P28288 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ABCD3P28288 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 AP000568.1-201ENST00000282964 442 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 SNORA2.3-201ENST00000383920 135 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 AL121978.1-201ENST00000402778 359 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 RPL23AP27-201ENST00000415161 451 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.7□□□□□ -1.66
ABCD3P28288 NUP35P2-201ENST00000416748 943 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.7□□□□□ -1.66
ABCD3P28288 AL513175.2-201ENST00000422071 443 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.7□□□□□ -1.66
ABCD3P28288 UBE2V1P1-201ENST00000430836 445 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.7□□□□□ -1.66
ABCD3P28288 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.7□□□□□ -1.66
ABCD3P28288 AC092393.1-201ENST00000439625 742 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ABCD3P28288 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.7□□□□□ -1.66
ABCD3P28288 PRPF38AP1-201ENST00000451976 933 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 SNORD11.1-201ENST00000459482 85 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.7□□□□□ -1.66
ABCD3P28288 AC091180.1-201ENST00000462104 372 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.7□□□□□ -1.66
ABCD3P28288 AP000893.1-201ENST00000474462 794 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.7□□□□□ -1.66
ABCD3P28288 OR5M14P-201ENST00000506803 618 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 OR5H4P-201ENST00000510851 923 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 AC109471.1-201ENST00000511631 612 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.7□□□□□ -1.66
ABCD3P28288 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.7□□□□□ -1.66
ABCD3P28288 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.7□□□□□ -1.66
ABCD3P28288 AC040958.1-201ENST00000561102 201 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 AC233702.9-201ENST00000581528 203 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.7□□□□□ -1.66
ABCD3P28288 AL354760.1-201ENST00000608357 643 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.7□□□□□ -1.66
ABCD3P28288 AL445423.1-201ENST00000609941 536 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 AC009704.2-201ENST00000618739 483 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 AL512506.2-201ENST00000624472 458 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.7□□□□□ -1.66
ABCD3P28288 AC090897.3-201ENST00000636973 1157 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.7□□□□□ -1.66
ABCD3P28288 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.7□□□□□ -1.66
ABCD3P28288 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.7□□□□□ -1.66
ABCD3P28288 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ABCD3P28288 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 HSPA8P18-201ENST00000439846 1928 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 ZNF652P1-201ENST00000442420 1309 ntBASIC4.7□□□□□ -1.66
ABCD3P28288 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCD3P28288 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ABCD3P28288 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ABCD3P28288 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ABCD3P28288 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
ABCD3P28288 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.69□□□□□ -1.66
ABCD3P28288 AP005901.5-201ENST00000545779 1796 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ABCD3P28288 RNA5SP305-201ENST00000362665 119 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 snoZ40.1-201ENST00000364540 72 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AC007618.1-201ENST00000366455 732 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms