Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.64□□□□□ -1.67
PTPN3P26045 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.64□□□□□ -1.67
PTPN3P26045 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.64□□□□□ -1.67
PTPN3P26045 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN3P26045 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.64□□□□□ -1.67
PTPN3P26045 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN3P26045 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN3P26045 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN3P26045 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PTPN3P26045 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PTPN3P26045 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN3P26045 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN3P26045 AL592437.2-201ENST00000421655 2434 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN3P26045 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN3P26045 AC083843.3-201ENST00000623679 2186 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN3P26045 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PTPN3P26045 SNORD56.4-201ENST00000363883 71 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 RNU6-98P-201ENST00000384173 107 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 MIR659-201ENST00000384963 97 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 RNA5SP397-201ENST00000391323 118 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 FCF1P5-201ENST00000406490 482 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 VDAC1P9-201ENST00000412766 841 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AC023128.2-201ENST00000420880 1223 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 MTCO1P43-201ENST00000431831 488 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AL359265.2-201ENST00000434367 631 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN3P26045 AL357520.1-201ENST00000441557 453 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN3P26045 TPTE2P6-202ENST00000445572 1007 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 CEACAMP6-201ENST00000452007 574 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AC010326.1-201ENST00000462726 602 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AC231760.1-201ENST00000498002 260 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AP003355.1-201ENST00000518956 587 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.63□□□□□ -1.67
PTPN3P26045 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN3P26045 RPL21P7-201ENST00000557463 483 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN3P26045 MIR4270-201ENST00000581799 70 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 MIR4443-201ENST00000585052 53 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 BNIP3P32-201ENST00000600015 554 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AC068790.7-201ENST00000602347 528 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AP002360.3-201ENST00000607673 710 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 AC005156.1-201ENST00000613371 573 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 RMST_10.1-201ENST00000616309 154 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
PTPN3P26045 AP003072.4-201ENST00000624580 310 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.63□□□□□ -1.67
PTPN3P26045 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.63□□□□□ -1.67
PTPN3P26045 CPHL1P-201ENST00000461341 3407 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN3P26045 VN2R3P-201ENST00000422626 1412 ntBASIC4.63□□□□□ -1.67
PTPN3P26045 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN3P26045 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PTPN3P26045 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PTPN3P26045 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PTPN3P26045 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PTPN3P26045 Z95327.2-201ENST00000414579 1873 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN3P26045 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
PTPN3P26045 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN3P26045 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN3P26045 LINC00622-201ENST00000562811 1570 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN3P26045 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.62□□□□□ -1.67
PTPN3P26045 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PTPN3P26045 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN3P26045 RNU1-20P-201ENST00000363314 162 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PTPN3P26045 SDHCP2-201ENST00000398565 501 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 RN7SKP167-201ENST00000411047 285 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.62□□□□□ -1.67
PTPN3P26045 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN3P26045 USP9YP9-201ENST00000429406 715 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.62□□□□□ -1.67
PTPN3P26045 AL049745.1-201ENST00000433953 286 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.62□□□□□ -1.67
PTPN3P26045 ACTR3P2-201ENST00000439585 1257 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 RPL23AP93-201ENST00000440847 484 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN3P26045 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.62□□□□□ -1.67
PTPN3P26045 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN3P26045 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN3P26045 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN3P26045 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN3P26045 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.62□□□□□ -1.67
PTPN3P26045 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 OR5H3P-201ENST00000502817 919 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN3P26045 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN3P26045 RNU5A-7P-201ENST00000515979 116 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN3P26045 NPM1P6-201ENST00000521088 871 ntBASIC4.62□□□□□ -1.67
PTPN3P26045 OR5AK3P-201ENST00000527486 1297 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms