Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.16□□□□□ -1.58
CD40P25942 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CD40P25942 AL118496.1-201ENST00000440201 1812 ntBASIC5.16□□□□□ -1.58
CD40P25942 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 AL022578.1-201ENST00000439330 1433 ntBASIC5.16□□□□□ -1.58
CD40P25942 AP005432.1-201ENST00000580891 3485 ntBASIC5.16□□□□□ -1.58
CD40P25942 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CD40P25942 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
CD40P25942 RNU1-150P-201ENST00000362491 162 ntBASIC5.16□□□□□ -1.58
CD40P25942 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 RNU6-533P-201ENST00000384144 107 ntBASIC5.16□□□□□ -1.58
CD40P25942 SNORA51.6-201ENST00000384151 125 ntBASIC5.16□□□□□ -1.58
CD40P25942 RNA5SP284-201ENST00000384547 118 ntBASIC5.16□□□□□ -1.58
CD40P25942 RNU6-952P-201ENST00000391164 108 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC092642.1-201ENST00000392417 425 ntBASIC5.16□□□□□ -1.58
CD40P25942 AL031985.1-201ENST00000392713 418 ntBASIC5.16□□□□□ -1.58
CD40P25942 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.16□□□□□ -1.58
CD40P25942 RN7SKP266-201ENST00000410232 287 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC116036.1-201ENST00000412199 367 ntBASIC5.16□□□□□ -1.58
CD40P25942 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 RPS17P17-201ENST00000419392 409 ntBASIC5.16□□□□□ -1.58
CD40P25942 Z97055.1-201ENST00000419730 712 ntBASIC5.16□□□□□ -1.58
CD40P25942 REREP1Y-201ENST00000422655 198 ntBASIC5.16□□□□□ -1.58
CD40P25942 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 BX323845.3-201ENST00000428215 527 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC109583.1-201ENST00000432156 268 ntBASIC5.16□□□□□ -1.58
CD40P25942 AL445928.1-201ENST00000435545 222 ntBASIC5.16□□□□□ -1.58
CD40P25942 REREP2Y-201ENST00000439103 200 ntBASIC5.16□□□□□ -1.58
CD40P25942 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 RPS7P3-201ENST00000443360 580 ntBASIC5.16□□□□□ -1.58
CD40P25942 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.16□□□□□ -1.58
CD40P25942 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.16□□□□□ -1.58
CD40P25942 RPL31P15-201ENST00000449770 338 ntBASIC5.16□□□□□ -1.58
CD40P25942 AL590365.1-201ENST00000450788 243 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 snoU109.1-201ENST00000459339 135 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CD40P25942 AC124945.1-201ENST00000485133 188 ntBASIC5.16□□□□□ -1.58
CD40P25942 RN7SL57P-201ENST00000493687 290 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC005726.1-201ENST00000494679 427 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 NDUFB4P2-201ENST00000509515 391 ntBASIC5.16□□□□□ -1.58
CD40P25942 RNU6-506P-201ENST00000516553 94 ntBASIC5.16□□□□□ -1.58
CD40P25942 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CD40P25942 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.16□□□□□ -1.58
CD40P25942 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.16□□□□□ -1.58
CD40P25942 AC063949.1-201ENST00000552900 865 ntBASIC5.16□□□□□ -1.58
CD40P25942 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 AC234778.2-201ENST00000566241 354 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 AC137800.2-201ENST00000574375 120 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 MIR3913-1-201ENST00000577744 102 ntBASIC5.16□□□□□ -1.58
CD40P25942 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.16□□□□□ -1.58
CD40P25942 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.16□□□□□ -1.58
CD40P25942 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.16□□□□□ -1.58
CD40P25942 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.16□□□□□ -1.58
CD40P25942 AC112191.3-201ENST00000604371 277 ntBASIC5.16□□□□□ -1.58
CD40P25942 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.16□□□□□ -1.58
CD40P25942 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC068722.2-201ENST00000618734 544 ntBASIC5.16□□□□□ -1.58
CD40P25942 AL139089.1-201ENST00000620372 975 ntBASIC5.16□□□□□ -1.58
CD40P25942 OR5H6-203ENST00000642105 978 ntBASIC5.16□□□□□ -1.58
CD40P25942 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.16□□□□□ -1.58
CD40P25942 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 AP000473.2-201ENST00000602659 1537 ntBASIC5.16□□□□□ -1.58
CD40P25942 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CD40P25942 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.16□□□□□ -1.58
CD40P25942 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CD40P25942 PARP4P2-201ENST00000446672 3326 ntBASIC5.16□□□□□ -1.58
CD40P25942 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.16□□□□□ -1.58
CD40P25942 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CD40P25942 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CD40P25942 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD40P25942 AL591135.1-201ENST00000401578 5914 ntBASIC5.16□□□□□ -1.58
CD40P25942 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CD40P25942 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CD40P25942 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.15□□□□□ -1.58
CD40P25942 HSPD1P8-201ENST00000400121 1658 ntBASIC5.15□□□□□ -1.58
CD40P25942 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CD40P25942 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CD40P25942 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CD40P25942 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CD40P25942 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms