Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.59□□□□□ -1.83
CTLA4P16410 RPL12P46-201ENST00000436610 195 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.59□□□□□ -1.83
CTLA4P16410 AL451050.1-201ENST00000450126 415 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 FCF1P7-201ENST00000451185 558 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 RPL7AP52-201ENST00000458096 790 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.59□□□□□ -1.83
CTLA4P16410 RPL38P1-201ENST00000460914 211 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 HPRT1P2-201ENST00000505250 544 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.59□□□□□ -1.83
CTLA4P16410 NDUFB4P12-201ENST00000513465 390 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.59□□□□□ -1.83
CTLA4P16410 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.59□□□□□ -1.83
CTLA4P16410 DYNLL1P4-201ENST00000549314 266 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTLA4P16410 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTLA4P16410 AC006116.5-201ENST00000591936 559 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 AC123786.2-201ENST00000603459 275 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 AC074276.2-201ENST00000619891 348 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 MIR8059-201ENST00000620427 81 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 MIR7641-1-201ENST00000627518 61 ntBASIC3.59□□□□□ -1.83
CTLA4P16410 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.59□□□□□ -1.83
CTLA4P16410 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.59□□□□□ -1.83
CTLA4P16410 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTLA4P16410 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.59□□□□□ -1.83
CTLA4P16410 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTLA4P16410 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CTLA4P16410 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.59□□□□□ -1.84
CTLA4P16410 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
CTLA4P16410 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CTLA4P16410 AC110792.3-201ENST00000595906 1614 ntBASIC3.59□□□□□ -1.84
CTLA4P16410 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.59□□□□□ -1.84
CTLA4P16410 OR10AB1P-202ENST00000641219 1686 ntBASIC3.59□□□□□ -1.84
CTLA4P16410 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTLA4P16410 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTLA4P16410 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CTLA4P16410 MIR365B-201ENST00000362317 111 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 SNORA60-201ENST00000362396 134 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 RNU6-984P-201ENST00000363236 109 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 ATP5F1P2-201ENST00000398143 760 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 GAPDHP49-201ENST00000421421 961 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.58□□□□□ -1.84
CTLA4P16410 CHIAP3-201ENST00000423668 1133 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 RPL18P10-201ENST00000425606 538 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.58□□□□□ -1.84
CTLA4P16410 AC073143.1-201ENST00000436316 395 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 ELOCP10-201ENST00000440624 327 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 TPT1P13-201ENST00000449760 499 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 AC006463.2-201ENST00000473326 348 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 AC105137.1-201ENST00000484355 562 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 RN7SL271P-201ENST00000487601 295 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 AC106806.2-201ENST00000509365 500 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTLA4P16410 AC034205.1-201ENST00000520621 638 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.58□□□□□ -1.84
CTLA4P16410 MIR3138-201ENST00000585238 82 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.58□□□□□ -1.84
CTLA4P16410 ELOCP34-201ENST00000604436 327 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 ARF4P1-201ENST00000605447 541 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.58□□□□□ -1.84
CTLA4P16410 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CTLA4P16410 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTLA4P16410 AC005261.4-201ENST00000600047 1385 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTLA4P16410 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CTLA4P16410 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTLA4P16410 AC074029.4-201ENST00000624796 1859 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 AC009313.2-201ENST00000417893 1941 ntBASIC3.58□□□□□ -1.84
CTLA4P16410 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTLA4P16410 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTLA4P16410 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTLA4P16410 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CTLA4P16410 OR10J6P-201ENST00000289731 930 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTLA4P16410 OR11H4-201ENST00000315409 1082 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTLA4P16410 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CTLA4P16410 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTLA4P16410 RPS27AP11-201ENST00000402798 447 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 MIR1251-201ENST00000408552 70 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 RN7SKP33-201ENST00000410942 340 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 HSPE1P12-201ENST00000412576 301 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.57□□□□□ -1.84
CTLA4P16410 AC093084.1-201ENST00000424233 687 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.57□□□□□ -1.84
CTLA4P16410 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.57□□□□□ -1.84
CTLA4P16410 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.57□□□□□ -1.84
CTLA4P16410 HMGB3P22-202ENST00000451823 572 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 AL354710.1-201ENST00000453641 246 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.57□□□□□ -1.84
CTLA4P16410 AC092691.2-201ENST00000461787 803 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
CTLA4P16410 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.57□□□□□ -1.84
CTLA4P16410 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.57□□□□□ -1.84
CTLA4P16410 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.57□□□□□ -1.84
CTLA4P16410 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 RAB9BP1-201ENST00000519581 626 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 C1GALT1P3-201ENST00000522049 819 ntBASIC3.57□□□□□ -1.84
CTLA4P16410 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.57□□□□□ -1.84
CTLA4P16410 AP003730.1-201ENST00000524605 285 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms