Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC022467.1-201ENST00000614738 749 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CXCL1P09341 AC087385.3-201ENST00000620477 187 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
CXCL1P09341 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL1P09341 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL1P09341 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
CXCL1P09341 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL1P09341 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL1P09341 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL1P09341 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL1P09341 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CXCL1P09341 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CXCL1P09341 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CXCL1P09341 MIR659-201ENST00000384963 97 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CXCL1P09341 AL391417.1-201ENST00000404100 426 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.13□□□□□ -1.91
CXCL1P09341 AC010740.1-201ENST00000417035 684 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 RPL7P53-201ENST00000421245 739 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 AL355433.1-201ENST00000422804 300 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.13□□□□□ -1.91
CXCL1P09341 NDUFA5P1-201ENST00000433858 341 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.13□□□□□ -1.91
CXCL1P09341 HMGB3P21-201ENST00000452483 547 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 ANP32BP2-201ENST00000454525 545 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 RPL36AP13-201ENST00000457490 317 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 AC092324.1-201ENST00000468671 324 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 AP000893.1-201ENST00000474462 794 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 RPS23P1-201ENST00000491662 432 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CXCL1P09341 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.13□□□□□ -1.91
CXCL1P09341 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.13□□□□□ -1.91
CXCL1P09341 AC147055.3-201ENST00000510547 851 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.13□□□□□ -1.91
CXCL1P09341 IGLVIV-64-201ENST00000518581 301 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 AC109635.6-201ENST00000525487 1113 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.13□□□□□ -1.91
CXCL1P09341 AC092747.2-201ENST00000545069 983 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CXCL1P09341 PCNPP1-201ENST00000552501 511 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 MIR4716-201ENST00000579628 84 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 RN7SL690P-201ENST00000582087 240 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.13□□□□□ -1.91
CXCL1P09341 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.13□□□□□ -1.91
CXCL1P09341 OR6C71P-202ENST00000641886 1107 ntBASIC3.13□□□□□ -1.91
CXCL1P09341 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.13□□□□□ -1.91
CXCL1P09341 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CXCL1P09341 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CXCL1P09341 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.13□□□□□ -1.91
CXCL1P09341 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CXCL1P09341 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.12□□□□□ -1.91
CXCL1P09341 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
CXCL1P09341 AL139811.1-201ENST00000424779 2299 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.12□□□□□ -1.91
CXCL1P09341 BRAFP1-201ENST00000445336 2703 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 XIAPP3-201ENST00000312918 795 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL1P09341 SNORA11F-201ENST00000408237 128 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 RPL23AP27-201ENST00000415161 451 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.12□□□□□ -1.91
CXCL1P09341 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 NFYAP1-201ENST00000431953 972 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL1P09341 AL512326.1-201ENST00000443050 721 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL1P09341 MRPS31P2-201ENST00000451581 518 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 RPL23AP81-201ENST00000455252 467 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 DHFRP3-201ENST00000455595 559 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 AC010468.1-201ENST00000461022 817 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL1P09341 RN7SL271P-201ENST00000487601 295 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.12□□□□□ -1.91
CXCL1P09341 AC093763.2-201ENST00000505334 1223 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL1P09341 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL1P09341 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.12□□□□□ -1.91
CXCL1P09341 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.12□□□□□ -1.91
CXCL1P09341 RNA5SP73-201ENST00000516744 108 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 AP000676.2-201ENST00000529711 301 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 OR4C2P-201ENST00000530855 1064 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms