Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.39□□□□□ -1.87
CTSDP07339 AC244205.2-202ENST00000635781 342 ntBASIC3.39□□□□□ -1.87
CTSDP07339 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSDP07339 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CTSDP07339 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.39□□□□□ -1.87
CTSDP07339 AC007342.7-201ENST00000624610 2337 ntBASIC3.39□□□□□ -1.87
CTSDP07339 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSDP07339 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSDP07339 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.39□□□□□ -1.87
CTSDP07339 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSDP07339 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.39□□□□□ -1.87
CTSDP07339 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTSDP07339 MTND4P10-201ENST00000446199 1363 ntBASIC3.38□□□□□ -1.87
CTSDP07339 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTSDP07339 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTSDP07339 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTSDP07339 AC011155.1-201ENST00000316512 456 ntBASIC3.38□□□□□ -1.87
CTSDP07339 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CTSDP07339 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CTSDP07339 RNU1-18P-201ENST00000363062 164 ntBASIC3.38□□□□□ -1.87
CTSDP07339 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CTSDP07339 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTSDP07339 RNA5SP36-201ENST00000410197 133 ntBASIC3.38□□□□□ -1.87
CTSDP07339 MFSD13B-201ENST00000420133 1290 ntBASIC3.38□□□□□ -1.87
CTSDP07339 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.38□□□□□ -1.87
CTSDP07339 FTH1P16-201ENST00000435241 552 ntBASIC3.38□□□□□ -1.87
CTSDP07339 BTG3P1-201ENST00000435859 716 ntBASIC3.38□□□□□ -1.87
CTSDP07339 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.38□□□□□ -1.87
CTSDP07339 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.38□□□□□ -1.87
CTSDP07339 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.38□□□□□ -1.87
CTSDP07339 MTCO3P20-201ENST00000454926 688 ntBASIC3.38□□□□□ -1.87
CTSDP07339 HSPE1P22-201ENST00000456856 327 ntBASIC3.38□□□□□ -1.87
CTSDP07339 AC010307.1-201ENST00000467206 836 ntBASIC3.38□□□□□ -1.87
CTSDP07339 RN7SL738P-201ENST00000470264 297 ntBASIC3.38□□□□□ -1.87
CTSDP07339 RPL29P14-201ENST00000495837 428 ntBASIC3.38□□□□□ -1.87
CTSDP07339 AC068305.1-201ENST00000497406 726 ntBASIC3.38□□□□□ -1.87
CTSDP07339 AK3P4-201ENST00000504283 583 ntBASIC3.38□□□□□ -1.87
CTSDP07339 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.38□□□□□ -1.87
CTSDP07339 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTSDP07339 AC093824.1-201ENST00000508796 343 ntBASIC3.38□□□□□ -1.87
CTSDP07339 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.38□□□□□ -1.87
CTSDP07339 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.38□□□□□ -1.87
CTSDP07339 AGGF1P8-201ENST00000562979 1000 ntBASIC3.38□□□□□ -1.87
CTSDP07339 AC105036.1-201ENST00000566222 271 ntBASIC3.38□□□□□ -1.87
CTSDP07339 HNRNPCP4-201ENST00000571636 900 ntBASIC3.38□□□□□ -1.87
CTSDP07339 VN1R79P-201ENST00000593540 513 ntBASIC3.38□□□□□ -1.87
CTSDP07339 AC020915.5-201ENST00000596836 964 ntBASIC3.38□□□□□ -1.87
CTSDP07339 AC104785.1-201ENST00000603220 588 ntBASIC3.38□□□□□ -1.87
CTSDP07339 AL451044.1-201ENST00000604867 238 ntBASIC3.38□□□□□ -1.87
CTSDP07339 MIR7703-201ENST00000620784 77 ntBASIC3.38□□□□□ -1.87
CTSDP07339 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.38□□□□□ -1.87
CTSDP07339 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.38□□□□□ -1.87
CTSDP07339 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.38□□□□□ -1.87
CTSDP07339 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.38□□□□□ -1.87
CTSDP07339 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTSDP07339 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.38□□□□□ -1.87
CTSDP07339 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.38□□□□□ -1.87
CTSDP07339 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTSDP07339 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTSDP07339 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTSDP07339 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTSDP07339 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTSDP07339 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.37□□□□□ -1.87
CTSDP07339 AC022893.2-201ENST00000564832 3296 ntBASIC3.37□□□□□ -1.87
CTSDP07339 AL049555.1-201ENST00000562834 1933 ntBASIC3.37□□□□□ -1.87
CTSDP07339 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTSDP07339 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.37□□□□□ -1.87
CTSDP07339 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTSDP07339 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.37□□□□□ -1.87
CTSDP07339 AC007685.1-201ENST00000329806 452 ntBASIC3.37□□□□□ -1.87
CTSDP07339 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTSDP07339 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTSDP07339 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.37□□□□□ -1.87
CTSDP07339 RPS4XP9-201ENST00000405151 780 ntBASIC3.37□□□□□ -1.87
CTSDP07339 RPL6P29-201ENST00000414863 865 ntBASIC3.37□□□□□ -1.87
CTSDP07339 P2RY10P2-201ENST00000416730 913 ntBASIC3.37□□□□□ -1.87
CTSDP07339 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.37□□□□□ -1.87
CTSDP07339 AL356387.2-201ENST00000422272 243 ntBASIC3.37□□□□□ -1.87
CTSDP07339 CHIAP3-201ENST00000423668 1133 ntBASIC3.37□□□□□ -1.87
CTSDP07339 RPEP3-201ENST00000425462 676 ntBASIC3.37□□□□□ -1.87
CTSDP07339 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.37□□□□□ -1.87
CTSDP07339 AC092809.1-201ENST00000441469 474 ntBASIC3.37□□□□□ -1.87
CTSDP07339 TXNP2-201ENST00000443918 295 ntBASIC3.37□□□□□ -1.87
CTSDP07339 PHBP16-201ENST00000446318 950 ntBASIC3.37□□□□□ -1.87
CTSDP07339 AC004069.2-201ENST00000505438 1114 ntBASIC3.37□□□□□ -1.87
CTSDP07339 CDH12P4-201ENST00000517835 295 ntBASIC3.37□□□□□ -1.87
CTSDP07339 CDH12P3-201ENST00000517935 295 ntBASIC3.37□□□□□ -1.87
CTSDP07339 CDH12P1-201ENST00000518435 295 ntBASIC3.37□□□□□ -1.87
CTSDP07339 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTSDP07339 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.37□□□□□ -1.87
CTSDP07339 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.37□□□□□ -1.87
CTSDP07339 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CTSDP07339 AC090515.3-201ENST00000560431 315 ntBASIC3.37□□□□□ -1.87
CTSDP07339 RPL12P25-202ENST00000598100 674 ntBASIC3.37□□□□□ -1.87
CTSDP07339 AC114878.2-201ENST00000604863 1251 ntBASIC3.37□□□□□ -1.87
CTSDP07339 MIR6820-201ENST00000611508 62 ntBASIC3.37□□□□□ -1.87
CTSDP07339 AL591424.2-201ENST00000617023 128 ntBASIC3.37□□□□□ -1.87
CTSDP07339 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.37□□□□□ -1.87
CTSDP07339 EIF2AP4-201ENST00000424793 1781 ntBASIC3.37□□□□□ -1.87
CTSDP07339 AC090017.1-201ENST00000548612 1779 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms