Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 CEACAMP6-201ENST00000452007 574 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC079203.1-201ENST00000487972 404 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AK3P4-201ENST00000504283 583 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC010625.1-201ENST00000511296 403 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 OR5BM1P-201ENST00000512021 366 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC108043.1-201ENST00000512696 574 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC138938.1-201ENST00000515431 782 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 C1GALT1P3-201ENST00000522049 819 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AL049830.4-201ENST00000555149 351 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC002069.2-201ENST00000603580 883 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 AP003392.5-201ENST00000607857 415 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AL159169.2-201ENST00000610061 1269 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 AP000255.1-201ENST00000610276 676 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 VIS1.1-201ENST00000610517 203 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AP000648.2-201ENST00000624182 404 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC073869.10-201ENST00000642016 354 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC140134.1-201ENST00000511830 3544 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DOAP06340 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DOAP06340 ADAM24P-201ENST00000398655 2101 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DOAP06340 SNORD113-6-201ENST00000363345 75 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 RNU4-92P-201ENST00000363783 136 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 BMS1P3-201ENST00000372011 932 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 RNU6-224P-201ENST00000384055 107 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 SNORA70F-201ENST00000384142 135 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 RNU6-83P-201ENST00000384568 112 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 RAB28P1-201ENST00000411517 641 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 AL591848.1-201ENST00000413092 322 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 CBX1P3-201ENST00000413296 527 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 TRGV6-201ENST00000417928 299 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AL645608.4-201ENST00000423619 154 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 MTND4P6-201ENST00000438297 472 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC092393.1-201ENST00000439625 742 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AL157827.1-201ENST00000447622 132 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 MTND4LP3-201ENST00000468320 276 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 MTND2P14-201ENST00000482139 351 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC111000.2-201ENST00000507775 550 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC135628.1-201ENST00000568867 534 ntBASIC5.65□□□□□ -1.5
HLA-DOAP06340 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
HLA-DOAP06340 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DOAP06340 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.65□□□□□ -1.51
HLA-DOAP06340 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.65□□□□□ -1.51
HLA-DOAP06340 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.65□□□□□ -1.51
HLA-DOAP06340 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DOAP06340 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DOAP06340 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOAP06340 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 SMG1P4-204ENST00000523028 4131 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms