Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.39□□□□□ -2.03
APOBP04114 UBE2V1P1-201ENST00000430836 445 ntBASIC2.39□□□□□ -2.03
APOBP04114 HMGB3P9-201ENST00000441799 583 ntBASIC2.39□□□□□ -2.03
APOBP04114 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBP04114 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
APOBP04114 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.39□□□□□ -2.03
APOBP04114 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.39□□□□□ -2.03
APOBP04114 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBP04114 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBP04114 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBP04114 AC063950.1-201ENST00000552036 308 ntBASIC2.39□□□□□ -2.03
APOBP04114 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBP04114 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBP04114 AC119674.1-212ENST00000641155 993 ntBASIC2.39□□□□□ -2.03
APOBP04114 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC2.39□□□□□ -2.03
APOBP04114 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
APOBP04114 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
APOBP04114 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.39□□□□□ -2.03
APOBP04114 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC2.39□□□□□ -2.03
APOBP04114 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
APOBP04114 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
APOBP04114 LYST-202ENST00000389794 12985 ntTSL 5 BASIC2.39□□□□□ -2.03
APOBP04114 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
APOBP04114 VDAC1P9-201ENST00000412766 841 ntBASIC2.39□□□□□ -2.03
APOBP04114 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.39□□□□□ -2.03
APOBP04114 BTF3P5-201ENST00000457252 467 ntBASIC2.39□□□□□ -2.03
APOBP04114 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBP04114 AC006539.2-201ENST00000601729 572 ntBASIC2.39□□□□□ -2.03
APOBP04114 AC135507.2-201ENST00000612443 309 ntBASIC2.39□□□□□ -2.03
APOBP04114 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
APOBP04114 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
APOBP04114 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 AC010266.2-201ENST00000564741 3255 ntBASIC2.38□□□□□ -2.03
APOBP04114 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
APOBP04114 IL6STP1-201ENST00000346911 1020 ntBASIC2.38□□□□□ -2.03
APOBP04114 BX323014.1-201ENST00000412876 237 ntBASIC2.38□□□□□ -2.03
APOBP04114 UBTFL3-201ENST00000418934 1024 ntBASIC2.38□□□□□ -2.03
APOBP04114 APOOP2-201ENST00000461561 539 ntBASIC2.38□□□□□ -2.03
APOBP04114 UBTFL6-201ENST00000477929 1024 ntBASIC2.38□□□□□ -2.03
APOBP04114 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC2.38□□□□□ -2.03
APOBP04114 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.38□□□□□ -2.03
APOBP04114 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 OR8I1P-201ENST00000529291 931 ntBASIC2.38□□□□□ -2.03
APOBP04114 CR383656.14-201ENST00000551951 406 ntBASIC2.38□□□□□ -2.03
APOBP04114 AC022968.1-201ENST00000567372 442 ntBASIC2.38□□□□□ -2.03
APOBP04114 AC012417.1-201ENST00000582307 1039 ntBASIC2.38□□□□□ -2.03
APOBP04114 AC006116.10-201ENST00000591836 581 ntBASIC2.38□□□□□ -2.03
APOBP04114 AC110801.1-201ENST00000623590 212 ntBASIC2.38□□□□□ -2.03
APOBP04114 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 HSPA8P17-201ENST00000427029 1382 ntBASIC2.38□□□□□ -2.03
APOBP04114 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.38□□□□□ -2.03
APOBP04114 CDY11P-201ENST00000447168 1651 ntBASIC2.38□□□□□ -2.03
APOBP04114 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
APOBP04114 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC2.38□□□□□ -2.03
APOBP04114 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
APOBP04114 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
APOBP04114 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
APOBP04114 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 RNA5SP51-201ENST00000364750 119 ntBASIC2.38□□□□□ -2.03
APOBP04114 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
APOBP04114 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.38□□□□□ -2.03
APOBP04114 AL831737.1-201ENST00000441288 271 ntBASIC2.38□□□□□ -2.03
APOBP04114 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 RPS3AP46-201ENST00000448352 682 ntBASIC2.38□□□□□ -2.03
APOBP04114 CCRL1P1-201ENST00000449542 1053 ntBASIC2.38□□□□□ -2.03
APOBP04114 RPL38P1-201ENST00000460914 211 ntBASIC2.38□□□□□ -2.03
APOBP04114 FTH1P24-201ENST00000503502 462 ntBASIC2.38□□□□□ -2.03
APOBP04114 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.38□□□□□ -2.03
APOBP04114 PHBP17-201ENST00000528576 541 ntBASIC2.38□□□□□ -2.03
APOBP04114 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 AL022311.1-201ENST00000623726 19416 ntBASIC2.38□□□□□ -2.03
APOBP04114 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
APOBP04114 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 AC087650.1-201ENST00000431445 468 ntBASIC2.38□□□□□ -2.03
APOBP04114 RPL27AP5-201ENST00000469428 449 ntBASIC2.38□□□□□ -2.03
APOBP04114 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
APOBP04114 RNA5SP208-201ENST00000516156 78 ntBASIC2.38□□□□□ -2.03
APOBP04114 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.38□□□□□ -2.03
APOBP04114 MIR4472-2-201ENST00000582069 67 ntBASIC2.38□□□□□ -2.03
APOBP04114 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.38□□□□□ -2.03
APOBP04114 AC125494.3-201ENST00000602759 455 ntBASIC2.38□□□□□ -2.03
APOBP04114 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.38□□□□□ -2.03
APOBP04114 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
APOBP04114 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
APOBP04114 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOBP04114 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 MIR133A2-201ENST00000347538 102 ntBASIC2.37□□□□□ -2.03
APOBP04114 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.37□□□□□ -2.03
APOBP04114 TMED11P-201ENST00000479478 690 ntBASIC2.37□□□□□ -2.03
APOBP04114 AC004924.1-201ENST00000480160 781 ntBASIC2.37□□□□□ -2.03
APOBP04114 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.37□□□□□ -2.03
APOBP04114 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC2.37□□□□□ -2.03
APOBP04114 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms