Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AL445222.1-201ENST00000607259 628 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC012467.1-201ENST00000607740 256 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC055764.2-201ENST00000610089 670 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC116447.1-201ENST00000613153 453 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC107308.1-201ENST00000615897 301 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC090510.2-201ENST00000617465 629 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 MIR6715B-201ENST00000637172 77 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 NCAPGP1-201ENST00000505112 1814 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AL356489.2-201ENST00000566968 3528 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 NCLP2-201ENST00000416078 1462 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RNA5SP123-201ENST00000363244 119 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RNU1-87P-201ENST00000363727 170 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RNU6-1279P-201ENST00000383917 103 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RNU6-883P-201ENST00000384597 107 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RNA5SP498-201ENST00000411342 120 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RNU6-603P-201ENST00000411403 107 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RWDD4P2-201ENST00000426392 563 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC011742.1-201ENST00000431448 434 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RPEP2-201ENST00000432149 701 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 MTCO1P52-201ENST00000433928 531 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 PTMAP6-201ENST00000439110 327 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RPS15AP29-201ENST00000445539 400 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 EXTL2P1-201ENST00000446218 416 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 MTND5P8-201ENST00000449817 1083 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC010733.1-201ENST00000451515 401 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC012671.1-201ENST00000451912 203 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC104763.1-201ENST00000475274 360 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RWDD4P1-201ENST00000488019 565 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RPL36AP41-201ENST00000493820 306 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC093763.2-201ENST00000505334 1223 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC009101.1-201ENST00000568135 242 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC079171.1-201ENST00000568788 914 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC005242.1-201ENST00000585658 438 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC244505.7-201ENST00000599675 272 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC090525.3-201ENST00000605601 189 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC011472.4-201ENST00000615848 491 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AP004607.9-201ENST00000618202 316 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC018445.2-201ENST00000622987 260 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC244205.2-202ENST00000635781 342 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.24□□□□□ -1.89
HLA-DQA1P01909 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQA1P01909 RPS4XP5-202ENST00000449995 1334 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 OR11H5P-202ENST00000641612 1325 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 MIR105-2-201ENST00000385083 81 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 SDHCP2-201ENST00000398565 501 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 COX6B1P1-201ENST00000415962 213 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC093698.1-201ENST00000423843 571 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms