Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PDGFBP01127 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFBP01127 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFBP01127 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PDGFBP01127 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFBP01127 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.59□□□□□ -1.67
PDGFBP01127 RNU6-452P-201ENST00000384406 107 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 RNU6ATAC-201ENST00000408749 126 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 RNU4-74P-201ENST00000411280 161 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.59□□□□□ -1.67
PDGFBP01127 AL353748.1-201ENST00000440753 474 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 DHFRP3-201ENST00000455595 559 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AC107398.1-201ENST00000486904 505 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFBP01127 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFBP01127 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.59□□□□□ -1.67
PDGFBP01127 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.59□□□□□ -1.67
PDGFBP01127 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.59□□□□□ -1.67
PDGFBP01127 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.59□□□□□ -1.67
PDGFBP01127 LSM3P2-201ENST00000551246 273 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.59□□□□□ -1.67
PDGFBP01127 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PDGFBP01127 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.59□□□□□ -1.67
PDGFBP01127 AL049555.1-201ENST00000562834 1933 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.59□□□□□ -1.67
PDGFBP01127 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.59□□□□□ -1.67
PDGFBP01127 AC053481.4-201ENST00000583164 216 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.59□□□□□ -1.67
PDGFBP01127 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.59□□□□□ -1.67
PDGFBP01127 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.59□□□□□ -1.67
PDGFBP01127 AL158163.1-201ENST00000603915 1649 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AC113403.1-201ENST00000604910 193 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AL008729.2-201ENST00000606393 473 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFBP01127 AC099669.2-201ENST00000616549 437 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.59□□□□□ -1.67
PDGFBP01127 AC011815.3-201ENST00000624194 473 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AC116563.2-201ENST00000624751 535 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 BMS1P21-201ENST00000634565 365 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 AC012442.3-202ENST00000636742 206 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PDGFBP01127 CASC19-204ENST00000641001 2055 ntBASIC4.59□□□□□ -1.67
PDGFBP01127 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
PDGFBP01127 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDGFBP01127 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.59□□□□□ -1.68
PDGFBP01127 ZFRP1-201ENST00000457579 2970 ntBASIC4.59□□□□□ -1.68
PDGFBP01127 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.59□□□□□ -1.68
PDGFBP01127 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDGFBP01127 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFBP01127 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFBP01127 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDGFBP01127 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDGFBP01127 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFBP01127 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDGFBP01127 RNA5SP130-201ENST00000364431 114 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFBP01127 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFBP01127 SNORA9-201ENST00000384215 133 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AL139095.3-201ENST00000419672 1203 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AC018644.1-201ENST00000429934 551 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 PPIAP13-201ENST00000434706 478 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 CBX1P4-201ENST00000439415 457 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 MTCO3P43-201ENST00000440974 771 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFBP01127 TPMTP4-201ENST00000450749 678 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 HMGB1P5-202ENST00000451497 985 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFBP01127 AC053481.1-201ENST00000467217 306 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
PDGFBP01127 AC025181.1-201ENST00000477507 416 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFBP01127 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.58□□□□□ -1.68
PDGFBP01127 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
PDGFBP01127 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFBP01127 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFBP01127 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFBP01127 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFBP01127 OR5BC1P-201ENST00000529327 739 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AC027369.5-201ENST00000533838 755 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.58□□□□□ -1.68
PDGFBP01127 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFBP01127 FKBP1BP1-201ENST00000553366 325 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFBP01127 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.58□□□□□ -1.68
PDGFBP01127 AC015849.2-201ENST00000605738 409 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AC018695.5-201ENST00000605872 315 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AL355816.1-201ENST00000607951 118 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AC055764.2-201ENST00000610089 670 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 CR589904.2-201ENST00000612533 440 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 AL356121.2-201ENST00000624715 780 ntBASIC4.58□□□□□ -1.68
PDGFBP01127 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFBP01127 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFBP01127 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
PDGFBP01127 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFBP01127 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFBP01127 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFBP01127 AL136164.3-201ENST00000624429 3978 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms