Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 NDUFA12P1-201ENST00000455914 406 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 snoU13.1-201ENST00000459157 104 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AP000926.1-201ENST00000479573 241 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.07□□□□□ -1.76
SEMA3DO95025 RPL35P6-201ENST00000490024 372 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 RPS27AP16-201ENST00000492222 470 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AC093720.1-201ENST00000505681 714 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.07□□□□□ -1.76
SEMA3DO95025 AC010476.1-201ENST00000519111 851 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.07□□□□□ -1.76
SEMA3DO95025 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.07□□□□□ -1.76
SEMA3DO95025 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.07□□□□□ -1.76
SEMA3DO95025 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SEMA3DO95025 AC068831.4-201ENST00000556118 109 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.07□□□□□ -1.76
SEMA3DO95025 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.07□□□□□ -1.76
SEMA3DO95025 MIR4716-201ENST00000579628 84 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AC007448.1-201ENST00000582714 234 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 MIR5096-201ENST00000583713 70 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AC010200.2-201ENST00000605098 235 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.07□□□□□ -1.76
SEMA3DO95025 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.07□□□□□ -1.76
SEMA3DO95025 MIR7702-201ENST00000621931 59 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AC138907.10-201ENST00000623708 983 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.07□□□□□ -1.76
SEMA3DO95025 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEMA3DO95025 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEMA3DO95025 AC018555.1-201ENST00000567548 1980 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SEMA3DO95025 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.07□□□□□ -1.76
SEMA3DO95025 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
SEMA3DO95025 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SEMA3DO95025 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
SEMA3DO95025 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
SEMA3DO95025 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SEMA3DO95025 MIR937-201ENST00000401271 86 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 AL607077.1-201ENST00000401718 499 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.06□□□□□ -1.76
SEMA3DO95025 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.06□□□□□ -1.76
SEMA3DO95025 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SEMA3DO95025 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.06□□□□□ -1.76
SEMA3DO95025 RPS29P17-201ENST00000430795 166 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 ELOCP18-201ENST00000434209 337 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 UBE2V2P1-201ENST00000434717 398 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 RPL7P28-201ENST00000437739 740 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SEMA3DO95025 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.06□□□□□ -1.76
SEMA3DO95025 NPM1P52-201ENST00000518264 846 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.06□□□□□ -1.76
SEMA3DO95025 AC109635.6-201ENST00000525487 1113 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 AC092851.1-201ENST00000535964 478 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.06□□□□□ -1.76
SEMA3DO95025 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.06□□□□□ -1.76
SEMA3DO95025 AC084033.1-201ENST00000550830 633 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 CBX3P5-201ENST00000552017 521 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.06□□□□□ -1.76
SEMA3DO95025 AL049844.2-201ENST00000604280 628 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 AL356218.2-201ENST00000605264 187 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.06□□□□□ -1.76
SEMA3DO95025 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SEMA3DO95025 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.06□□□□□ -1.76
SEMA3DO95025 AC008013.2-202ENST00000637965 364 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 AC106871.1-201ENST00000568324 3102 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SEMA3DO95025 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.06□□□□□ -1.76
SEMA3DO95025 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.06□□□□□ -1.76
SEMA3DO95025 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SEMA3DO95025 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.06□□□□□ -1.76
SEMA3DO95025 MARK2P15-201ENST00000432204 2186 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 AC092162.3-201ENST00000624511 1624 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.06□□□□□ -1.76
SEMA3DO95025 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SEMA3DO95025 AP001486.2-201ENST00000561652 5113 ntBASIC4.06□□□□□ -1.76
SEMA3DO95025 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SEMA3DO95025 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.05□□□□□ -1.76
SEMA3DO95025 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SEMA3DO95025 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.05□□□□□ -1.76
SEMA3DO95025 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
SEMA3DO95025 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SEMA3DO95025 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SEMA3DO95025 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SEMA3DO95025 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.05□□□□□ -1.76
SEMA3DO95025 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.05□□□□□ -1.76
SEMA3DO95025 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.05□□□□□ -1.76
SEMA3DO95025 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SEMA3DO95025 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.05□□□□□ -1.76
SEMA3DO95025 OR4K17-201ENST00000315543 1032 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 AC007685.1-201ENST00000329806 452 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 RNU1-14P-201ENST00000362759 152 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 AL583835.1-201ENST00000399570 407 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 MIR1183-201ENST00000408856 89 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 AL138785.1-201ENST00000425821 331 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.05□□□□□ -1.76
SEMA3DO95025 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SEMA3DO95025 ELOCP8-201ENST00000439309 332 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 RPL23AP89-201ENST00000439324 255 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 ELOCP15-201ENST00000442090 332 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.05□□□□□ -1.76
SEMA3DO95025 EEF1A1P1-201ENST00000447052 739 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms