Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LDB2O43679 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.75□□□□□ -1.65
LDB2O43679 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LDB2O43679 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.75□□□□□ -1.65
LDB2O43679 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LDB2O43679 RNU1-82P-201ENST00000390851 165 ntBASIC4.75□□□□□ -1.65
LDB2O43679 ATP5F1P2-201ENST00000398143 760 ntBASIC4.75□□□□□ -1.65
LDB2O43679 MTCO1P56-201ENST00000401674 224 ntBASIC4.75□□□□□ -1.65
LDB2O43679 RPS27AP11-201ENST00000402798 447 ntBASIC4.75□□□□□ -1.65
LDB2O43679 AP000357.1-201ENST00000409926 1165 ntBASIC4.75□□□□□ -1.65
LDB2O43679 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.75□□□□□ -1.65
LDB2O43679 AC246680.2-201ENST00000422106 389 ntBASIC4.75□□□□□ -1.65
LDB2O43679 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.75□□□□□ -1.65
LDB2O43679 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.75□□□□□ -1.65
LDB2O43679 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.75□□□□□ -1.65
LDB2O43679 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.75□□□□□ -1.65
LDB2O43679 AL592437.1-201ENST00000443781 492 ntBASIC4.75□□□□□ -1.65
LDB2O43679 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.75□□□□□ -1.65
LDB2O43679 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.75□□□□□ -1.65
LDB2O43679 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.75□□□□□ -1.65
LDB2O43679 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.75□□□□□ -1.65
LDB2O43679 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.75□□□□□ -1.65
LDB2O43679 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.75□□□□□ -1.65
LDB2O43679 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.75□□□□□ -1.65
LDB2O43679 AC138938.1-201ENST00000515431 782 ntBASIC4.75□□□□□ -1.65
LDB2O43679 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LDB2O43679 AP001880.2-201ENST00000538233 448 ntBASIC4.75□□□□□ -1.65
LDB2O43679 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.75□□□□□ -1.65
LDB2O43679 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.75□□□□□ -1.65
LDB2O43679 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.75□□□□□ -1.65
LDB2O43679 MIR4675-201ENST00000577898 77 ntBASIC4.75□□□□□ -1.65
LDB2O43679 MIR3936-201ENST00000584304 110 ntBASIC4.75□□□□□ -1.65
LDB2O43679 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 RNF138P2-201ENST00000603490 592 ntBASIC4.75□□□□□ -1.65
LDB2O43679 IMMP1LP1-201ENST00000605170 488 ntBASIC4.75□□□□□ -1.65
LDB2O43679 AL138478.1-201ENST00000612252 832 ntBASIC4.75□□□□□ -1.65
LDB2O43679 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 LINC01808-202ENST00000641680 1116 ntBASIC4.75□□□□□ -1.65
LDB2O43679 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LDB2O43679 ZFRP1-201ENST00000457579 2970 ntBASIC4.75□□□□□ -1.65
LDB2O43679 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LDB2O43679 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LDB2O43679 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LDB2O43679 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.75□□□□□ -1.65
LDB2O43679 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LDB2O43679 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LDB2O43679 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.75□□□□□ -1.65
LDB2O43679 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.74□□□□□ -1.65
LDB2O43679 AC012321.1-201ENST00000561622 1588 ntBASIC4.74□□□□□ -1.65
LDB2O43679 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.74□□□□□ -1.65
LDB2O43679 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 SAMMSON-213ENST00000641336 1521 ntBASIC4.74□□□□□ -1.65
LDB2O43679 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LDB2O43679 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.74□□□□□ -1.65
LDB2O43679 RNU6-452P-201ENST00000384406 107 ntBASIC4.74□□□□□ -1.65
LDB2O43679 VTA1P1-201ENST00000414044 866 ntBASIC4.74□□□□□ -1.65
LDB2O43679 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.74□□□□□ -1.65
LDB2O43679 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.74□□□□□ -1.65
LDB2O43679 NRBF2P3-201ENST00000432731 865 ntBASIC4.74□□□□□ -1.65
LDB2O43679 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.74□□□□□ -1.65
LDB2O43679 EEF1A1P39-201ENST00000440791 250 ntBASIC4.74□□□□□ -1.65
LDB2O43679 MTND2P22-201ENST00000444325 1033 ntBASIC4.74□□□□□ -1.65
LDB2O43679 HMGB3P6-201ENST00000444896 598 ntBASIC4.74□□□□□ -1.65
LDB2O43679 AC104651.2-201ENST00000447549 528 ntBASIC4.74□□□□□ -1.65
LDB2O43679 AC079168.2-201ENST00000453977 416 ntBASIC4.74□□□□□ -1.65
LDB2O43679 AL591473.1-201ENST00000464297 313 ntBASIC4.74□□□□□ -1.65
LDB2O43679 AC063943.1-201ENST00000465434 453 ntBASIC4.74□□□□□ -1.65
LDB2O43679 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.74□□□□□ -1.65
LDB2O43679 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.74□□□□□ -1.65
LDB2O43679 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.74□□□□□ -1.65
LDB2O43679 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.74□□□□□ -1.65
LDB2O43679 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.74□□□□□ -1.65
LDB2O43679 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.74□□□□□ -1.65
LDB2O43679 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.74□□□□□ -1.65
LDB2O43679 AL390726.5-202ENST00000564800 256 ntBASIC4.74□□□□□ -1.65
LDB2O43679 VN1R78P-201ENST00000597393 564 ntBASIC4.74□□□□□ -1.65
LDB2O43679 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 AC021171.1-201ENST00000603137 706 ntBASIC4.74□□□□□ -1.65
LDB2O43679 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.74□□□□□ -1.65
LDB2O43679 AC013468.1-201ENST00000608680 598 ntBASIC4.74□□□□□ -1.65
LDB2O43679 AC093783.1-201ENST00000612976 329 ntBASIC4.74□□□□□ -1.65
LDB2O43679 AC011472.4-201ENST00000615848 491 ntBASIC4.74□□□□□ -1.65
LDB2O43679 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.74□□□□□ -1.65
LDB2O43679 AC091304.6-201ENST00000619761 202 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms