Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.49□□□□□ -1.69
TO15178 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.49□□□□□ -1.69
TO15178 RN7SL339P-201ENST00000580597 296 ntBASIC4.49□□□□□ -1.69
TO15178 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.49□□□□□ -1.69
TO15178 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.49□□□□□ -1.69
TO15178 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.49□□□□□ -1.69
TO15178 AL121932.1-201ENST00000605542 214 ntBASIC4.49□□□□□ -1.69
TO15178 AL021707.7-201ENST00000607991 416 ntBASIC4.49□□□□□ -1.69
TO15178 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.49□□□□□ -1.69
TO15178 AC243654.2-201ENST00000612843 443 ntBASIC4.49□□□□□ -1.69
TO15178 AC091046.2-201ENST00000620775 665 ntBASIC4.49□□□□□ -1.69
TO15178 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
TO15178 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.49□□□□□ -1.69
TO15178 MIR6715B-201ENST00000637172 77 ntBASIC4.49□□□□□ -1.69
TO15178 OR2L1P-202ENST00000641567 1023 ntBASIC4.49□□□□□ -1.69
TO15178 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TO15178 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 AL031119.1-201ENST00000404707 1879 ntBASIC4.49□□□□□ -1.69
TO15178 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TO15178 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TO15178 DHX9P1-201ENST00000436565 3076 ntBASIC4.48□□□□□ -1.69
TO15178 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TO15178 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
TO15178 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.48□□□□□ -1.69
TO15178 AC106754.1-201ENST00000562632 1513 ntBASIC4.48□□□□□ -1.69
TO15178 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
TO15178 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TO15178 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TO15178 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TO15178 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TO15178 RNU6-236P-201ENST00000363886 106 ntBASIC4.48□□□□□ -1.69
TO15178 RNU6-1279P-201ENST00000383917 103 ntBASIC4.48□□□□□ -1.69
TO15178 AL603865.2-201ENST00000401679 213 ntBASIC4.48□□□□□ -1.69
TO15178 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.48□□□□□ -1.69
TO15178 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.48□□□□□ -1.69
TO15178 GAPDHP49-201ENST00000421421 961 ntBASIC4.48□□□□□ -1.69
TO15178 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.48□□□□□ -1.69
TO15178 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.48□□□□□ -1.69
TO15178 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TO15178 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.48□□□□□ -1.69
TO15178 TPTE2P6-202ENST00000445572 1007 ntBASIC4.48□□□□□ -1.69
TO15178 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TO15178 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.48□□□□□ -1.69
TO15178 AURKAPS2-201ENST00000454983 333 ntBASIC4.48□□□□□ -1.69
TO15178 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.48□□□□□ -1.69
TO15178 AC104164.3-201ENST00000467363 1258 ntBASIC4.48□□□□□ -1.69
TO15178 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.48□□□□□ -1.69
TO15178 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TO15178 TRAV31-201ENST00000502780 342 ntBASIC4.48□□□□□ -1.69
TO15178 HPRT1P2-201ENST00000505250 544 ntBASIC4.48□□□□□ -1.69
TO15178 RNU6-276P-201ENST00000516114 96 ntBASIC4.48□□□□□ -1.69
TO15178 RNA5SP303-201ENST00000516192 130 ntBASIC4.48□□□□□ -1.69
TO15178 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.48□□□□□ -1.69
TO15178 OR5D15P-201ENST00000531671 942 ntBASIC4.48□□□□□ -1.69
TO15178 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.48□□□□□ -1.69
TO15178 AC006518.2-201ENST00000542513 940 ntBASIC4.48□□□□□ -1.69
TO15178 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.48□□□□□ -1.69
TO15178 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.48□□□□□ -1.69
TO15178 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.48□□□□□ -1.69
TO15178 AL049839.1-201ENST00000556151 657 ntBASIC4.48□□□□□ -1.69
TO15178 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.48□□□□□ -1.69
TO15178 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.48□□□□□ -1.69
TO15178 AL355816.1-201ENST00000607951 118 ntBASIC4.48□□□□□ -1.69
TO15178 AC027449.1-201ENST00000608890 407 ntBASIC4.48□□□□□ -1.69
TO15178 AC015914.2-201ENST00000618167 288 ntBASIC4.48□□□□□ -1.69
TO15178 AL022401.1-201ENST00000619498 108 ntBASIC4.48□□□□□ -1.69
TO15178 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.48□□□□□ -1.69
TO15178 AC139713.2-210ENST00000641741 992 ntBASIC4.48□□□□□ -1.69
TO15178 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.48□□□□□ -1.69
TO15178 AC022893.2-201ENST00000564832 3296 ntBASIC4.48□□□□□ -1.69
TO15178 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TO15178 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.48□□□□□ -1.69
TO15178 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TO15178 AL445487.1-201ENST00000415694 1580 ntBASIC4.48□□□□□ -1.69
TO15178 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TO15178 ZFRP1-201ENST00000457579 2970 ntBASIC4.47□□□□□ -1.69
TO15178 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TO15178 IRF5P1-201ENST00000504852 2164 ntBASIC4.47□□□□□ -1.69
TO15178 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TO15178 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.47□□□□□ -1.69
TO15178 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TO15178 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TO15178 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TO15178 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TO15178 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TO15178 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TO15178 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.47□□□□□ -1.69
TO15178 LINC00993-201ENST00000420453 540 ntBASIC4.47□□□□□ -1.69
TO15178 OR5AW1P-201ENST00000426334 1006 ntBASIC4.47□□□□□ -1.69
TO15178 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.47□□□□□ -1.69
TO15178 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.47□□□□□ -1.69
TO15178 AL451139.1-201ENST00000434718 346 ntBASIC4.47□□□□□ -1.69
TO15178 RPL12P3-201ENST00000440080 396 ntBASIC4.47□□□□□ -1.69
TO15178 AC073648.4-201ENST00000442655 781 ntBASIC4.47□□□□□ -1.69
TO15178 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.47□□□□□ -1.69
TO15178 MTND2P8-201ENST00000450555 1025 ntBASIC4.47□□□□□ -1.69
TO15178 RPS5P7-201ENST00000456664 608 ntBASIC4.47□□□□□ -1.69
TO15178 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.47□□□□□ -1.69
TO15178 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms