Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
PCDHB13Q9Y5F0 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
PCDHB13Q9Y5F0 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
PCDHB13Q9Y5F0 DLD-205ENST00000440410 1993 ntTSL 2 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 RN7SKP23-201ENST00000625159 4301 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC090643.1-201ENST00000623600 3100 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 MIR411-201ENST00000362239 96 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 Y_RNA.199-201ENST00000364014 102 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 MIR498-201ENST00000385134 124 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC016769.3-201ENST00000396562 315 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 GAPDHP57-201ENST00000424400 585 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 HMGN1P2-201ENST00000445197 310 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 RPL23AP15-201ENST00000450202 459 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC022296.2-201ENST00000512424 202 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 HIGD1AP5-201ENST00000529959 259 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC026371.1-201ENST00000551867 419 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC106782.4-201ENST00000568264 210 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 RN7SL786P-201ENST00000579130 298 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 U2.17-201ENST00000611454 95 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 GTF2IP1-202ENST00000614592 2047 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC099667.1-201ENST00000624222 469 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AL353662.3-201ENST00000625131 237 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 BDP1P-201ENST00000582658 1990 ntBASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
PCDHB13Q9Y5F0 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 Y_RNA.183-201ENST00000363882 113 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 RNY3P11-201ENST00000364153 102 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 Y_RNA.209-201ENST00000364156 111 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 SNORA24.1-201ENST00000384401 135 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 RNU6-550P-201ENST00000391057 101 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 RNU6-387P-201ENST00000411331 105 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AC023141.10-201ENST00000415634 200 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 RPLP0P7-201ENST00000416050 667 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AL161742.1-201ENST00000418154 584 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AL158071.1-201ENST00000430315 461 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 RPS18P13-201ENST00000461260 454 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 RPL21P8-201ENST00000465083 535 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AC006967.1-201ENST00000467608 589 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AC098869.1-201ENST00000481627 292 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AC068305.1-201ENST00000497406 726 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AC108120.1-201ENST00000506543 991 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AC096745.1-201ENST00000509945 370 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 OR7E83P-201ENST00000511021 970 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 SNX18P27-201ENST00000523611 779 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 OR7E1P-201ENST00000533891 958 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 DUX4L52-201ENST00000549363 777 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AC139493.1-201ENST00000604368 397 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AL353898.2-201ENST00000623000 255 ntBASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms