Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 RPS3AP46-201ENST00000448352 682 ntBASIC5.06□□□□□ -1.6
SCN11AQ9UI33 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 AC016839.1-201ENST00000578162 867 ntBASIC5.06□□□□□ -1.6
SCN11AQ9UI33 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 AL391497.1-201ENST00000608671 547 ntBASIC5.06□□□□□ -1.6
SCN11AQ9UI33 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 AC007342.8-201ENST00000623278 678 ntBASIC5.06□□□□□ -1.6
SCN11AQ9UI33 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 RNA5SP51-201ENST00000364750 119 ntBASIC5.05□□□□□ -1.6
SCN11AQ9UI33 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 CYCSP30-201ENST00000546447 172 ntBASIC5.05□□□□□ -1.6
SCN11AQ9UI33 AC037471.2-201ENST00000564941 598 ntBASIC5.05□□□□□ -1.6
SCN11AQ9UI33 MIR5187-201ENST00000583479 76 ntBASIC5.05□□□□□ -1.6
SCN11AQ9UI33 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN11AQ9UI33 AC006484.1-201ENST00000435086 1884 ntBASIC5.05□□□□□ -1.6
SCN11AQ9UI33 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 BOLA3P4-201ENST00000418151 400 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AL121878.1-201ENST00000418638 859 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 TMX2P1-201ENST00000436507 708 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 HMGB1P37-201ENST00000439613 609 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 OR2BH1P-201ENST00000608850 864 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AC005261.6-201ENST00000623072 1387 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AC097634.1-201ENST00000604491 2467 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 PDSS1P1-201ENST00000422953 1114 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AC021146.3-201ENST00000511911 260 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AC093853.1-201ENST00000515689 483 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 RNU1-95P-201ENST00000516357 160 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 RNU1-128P-201ENST00000516704 160 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AC008802.1-201ENST00000519121 791 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 DUXAP2-201ENST00000519198 589 ntBASIC5.04□□□□□ -1.6
SCN11AQ9UI33 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN11AQ9UI33 AP001273.1-201ENST00000624493 3152 ntBASIC5.03□□□□□ -1.6
SCN11AQ9UI33 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 SYF2P2-201ENST00000417620 583 ntBASIC5.03□□□□□ -1.6
SCN11AQ9UI33 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 AL390879.2-203ENST00000426943 1121 ntBASIC5.03□□□□□ -1.6
SCN11AQ9UI33 AC026427.2-201ENST00000506228 536 ntBASIC5.03□□□□□ -1.6
SCN11AQ9UI33 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 BTG4P1-201ENST00000510421 183 ntBASIC5.03□□□□□ -1.6
SCN11AQ9UI33 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 MIR3124-201ENST00000582636 67 ntBASIC5.03□□□□□ -1.6
SCN11AQ9UI33 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 AL354760.1-201ENST00000608357 643 ntBASIC5.03□□□□□ -1.6
SCN11AQ9UI33 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN11AQ9UI33 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 AP004289.2-201ENST00000444413 1457 ntBASIC5.02□□□□□ -1.61
SCN11AQ9UI33 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms