Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 THAP12P8-201ENST00000447914 2115 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 AC068254.2-201ENST00000623938 3577 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 MAPK10-372ENST00000641954 3413 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 ATP5F1P3-201ENST00000397213 657 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 RPL21P65-201ENST00000406094 466 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 MTCO1P54-201ENST00000430139 712 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 RPS4XP4-201ENST00000443195 763 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 FABP3P2-201ENST00000453169 399 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 RPS6P2-201ENST00000454208 705 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 FTH1P21-201ENST00000512179 511 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 NDUFB4P12-201ENST00000513465 390 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 UBTFL9-201ENST00000534504 1148 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 RPL23AP87-202ENST00000573039 466 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 MIR3158-1-201ENST00000583596 81 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 AC110743.1-201ENST00000584870 478 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 AC068020.1-201ENST00000594215 661 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 MIR6868-201ENST00000611215 58 ntBASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.5□□□□□ -1.53
NPC1L1Q9UHC9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 RLIMP1-201ENST00000339626 1680 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AC011266.1-201ENST00000624119 3569 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 MIR372-201ENST00000362225 67 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AL589994.1-201ENST00000404962 340 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 OR2X1P-201ENST00000421144 687 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 YY1P1-201ENST00000427625 668 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 RPL21P89-201ENST00000444021 467 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 RN7SL542P-201ENST00000467147 294 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 RFPL4AP3-201ENST00000515267 345 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AC087369.1-201ENST00000520775 996 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AC053481.3-201ENST00000577881 843 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 NF1P10-201ENST00000613227 742 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 Z82217.1-201ENST00000625157 8149 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 AC139713.2-215ENST00000641428 5037 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.49□□□□□ -1.53
NPC1L1Q9UHC9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AC083843.2-201ENST00000568248 6253 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AL160275.2-201ENST00000412010 394 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AC006946.1-201ENST00000429106 328 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AC011742.1-201ENST00000431448 434 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 RPS11P1-201ENST00000451072 473 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 HPRT1P2-201ENST00000505250 544 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AC113398.2-201ENST00000507630 558 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 SNORD116-30-201ENST00000516468 85 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 IGKV2-38-201ENST00000517443 247 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 NDUFA5P2-201ENST00000519723 344 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AC091516.1-201ENST00000549191 703 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AC012417.1-201ENST00000582307 1039 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 VN1R81P-201ENST00000602085 372 ntBASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.48□□□□□ -1.53
NPC1L1Q9UHC9 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms