Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RN7SL807P-201ENST00000470923 297 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 IGKV2-38-201ENST00000517443 247 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.99□□□□□ -1.77
CHD7Q9P2D1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.99□□□□□ -1.77
CHD7Q9P2D1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CHD7Q9P2D1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.99□□□□□ -1.77
CHD7Q9P2D1 AC004014.2-201ENST00000623718 5122 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CHD7Q9P2D1 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CHD7Q9P2D1 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CHD7Q9P2D1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CHD7Q9P2D1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.99□□□□□ -1.77
CHD7Q9P2D1 UBTFL3-201ENST00000418934 1024 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 RPL23AP25-201ENST00000430973 463 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 RPL12P46-201ENST00000436610 195 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 UBTFL6-201ENST00000477929 1024 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 PHBP14-201ENST00000512887 367 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 AC010342.1-201ENST00000514047 877 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 SCARNA15.3-201ENST00000626315 122 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 SCARNA4.1-201ENST00000628597 123 ntBASIC3.99□□□□□ -1.77
CHD7Q9P2D1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 AC139426.3-201ENST00000605648 2059 ntBASIC3.98□□□□□ -1.77
CHD7Q9P2D1 BDP1P-201ENST00000582658 1990 ntBASIC3.98□□□□□ -1.77
CHD7Q9P2D1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 RPL23AP57-201ENST00000332361 466 ntBASIC3.98□□□□□ -1.77
CHD7Q9P2D1 RPS26P2-201ENST00000440331 348 ntBASIC3.98□□□□□ -1.77
CHD7Q9P2D1 AC025750.2-201ENST00000442609 450 ntBASIC3.98□□□□□ -1.77
CHD7Q9P2D1 AL139089.1-201ENST00000620372 975 ntBASIC3.98□□□□□ -1.77
CHD7Q9P2D1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 RPL26P28-201ENST00000451325 435 ntBASIC3.98□□□□□ -1.77
CHD7Q9P2D1 AC096576.1-201ENST00000489014 359 ntBASIC3.98□□□□□ -1.77
CHD7Q9P2D1 RPL7P24-201ENST00000493052 752 ntBASIC3.98□□□□□ -1.77
CHD7Q9P2D1 OR7E13P-201ENST00000526052 910 ntBASIC3.98□□□□□ -1.77
CHD7Q9P2D1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CHD7Q9P2D1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 GDA-209ENST00000545168 5362 ntTSL 2 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 USP9YP36-201ENST00000424581 829 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 USP9YP31-201ENST00000431405 881 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 AC233982.1-201ENST00000451247 436 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 NCAPGP2-201ENST00000557911 754 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 AC008833.1-201ENST00000611633 691 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 AL450472.3-201ENST00000615578 367 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 AC073073.2-201ENST00000609827 2578 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 AL049781.1-201ENST00000623195 3585 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 SNORD96B-201ENST00000386148 79 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 PGBD4P8-201ENST00000412993 562 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.97□□□□□ -1.77
CHD7Q9P2D1 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHD7Q9P2D1 TMED11P-201ENST00000479478 690 ntBASIC3.96□□□□□ -1.77
CHD7Q9P2D1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.96□□□□□ -1.77
CHD7Q9P2D1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CHD7Q9P2D1 MIR5186-201ENST00000577504 120 ntBASIC3.96□□□□□ -1.77
CHD7Q9P2D1 AC138932.5-201ENST00000617759 563 ntBASIC3.96□□□□□ -1.77
CHD7Q9P2D1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.96□□□□□ -1.77
CHD7Q9P2D1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
CHD7Q9P2D1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
CHD7Q9P2D1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
CHD7Q9P2D1 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHD7Q9P2D1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.96□□□□□ -1.78
CHD7Q9P2D1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHD7Q9P2D1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHD7Q9P2D1 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
CHD7Q9P2D1 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHD7Q9P2D1 RPL21P110-201ENST00000433345 446 ntBASIC3.96□□□□□ -1.78
CHD7Q9P2D1 AP001992.1-205ENST00000462248 379 ntBASIC3.96□□□□□ -1.78
CHD7Q9P2D1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.96□□□□□ -1.78
CHD7Q9P2D1 RAC1P2-201ENST00000511164 579 ntBASIC3.96□□□□□ -1.78
CHD7Q9P2D1 AC008802.1-201ENST00000519121 791 ntBASIC3.96□□□□□ -1.78
CHD7Q9P2D1 AC103843.2-201ENST00000530523 682 ntBASIC3.96□□□□□ -1.78
CHD7Q9P2D1 MIR5004-201ENST00000579078 107 ntBASIC3.96□□□□□ -1.78
CHD7Q9P2D1 AC104662.1-201ENST00000604448 511 ntBASIC3.96□□□□□ -1.78
CHD7Q9P2D1 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CHD7Q9P2D1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms