Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL513478.4-201ENST00000641636 310 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 EIF2AP4-201ENST00000424793 1781 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AC025031.4-201ENST00000621248 3271 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AC009229.4-201ENST00000623854 1947 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 ERCC6-202ENST00000374127 1782 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC103591.2-201ENST00000265259 766 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 RN7SKP44-201ENST00000363602 316 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 MIR129-1-201ENST00000384972 72 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 MIR92A2-201ENST00000385299 75 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 RNA5SP332-201ENST00000391063 115 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC240504.1-201ENST00000395709 845 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC073464.3-201ENST00000422564 712 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 DPY19L1P2-201ENST00000426647 915 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 RPL23AP1-201ENST00000428990 471 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC073264.2-201ENST00000448886 166 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 RN7SL98P-201ENST00000462271 300 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC109327.1-201ENST00000471666 403 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 RN7SL691P-201ENST00000494487 301 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC093824.1-201ENST00000508796 343 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 RNA5SP519-201ENST00000516480 119 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 RN7SL753P-201ENST00000581238 290 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 MIR4480-201ENST00000582492 71 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AL035461.2-201ENST00000619201 524 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 LINC02471-203ENST00000641941 4752 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 AL158163.1-201ENST00000603915 1649 ntBASIC3.92□□□□□ -1.78
VAPAQ9P0L0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 FAM3C2-201ENST00000312214 681 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 MIR550A3-201ENST00000390735 95 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC007064.3-201ENST00000422608 359 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 MTCO3P21-201ENST00000430791 643 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC011998.1-201ENST00000433403 117 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 S100A11P1-201ENST00000477525 312 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AP000926.3-201ENST00000497201 299 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC010627.1-201ENST00000503819 1294 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 OR5D15P-201ENST00000531671 942 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AP006289.1-201ENST00000538089 277 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 RFPL1S-203ENST00000539579 330 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC007424.1-203ENST00000554613 687 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 RPL12P25-202ENST00000598100 674 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 BMS1P7-201ENST00000602440 1052 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC104662.1-201ENST00000604448 511 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms