Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 TMX2P1-201ENST00000436507 708 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 SUMO2P3-201ENST00000438311 288 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AL450023.1-201ENST00000450868 751 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC243772.1-201ENST00000451620 410 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 OR52E3P-201ENST00000452083 936 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AL358876.1-201ENST00000453364 1075 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 RNU6-1218P-201ENST00000458990 108 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 RPL21P6-201ENST00000479171 504 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC025674.1-201ENST00000507074 324 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 MTATP6P22-201ENST00000507369 598 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 RNU6-1261P-201ENST00000517194 104 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 CYCSP22-201ENST00000517555 339 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 MTCYBP20-201ENST00000524239 1129 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 OR8G3P-201ENST00000533406 921 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 MIR3611-201ENST00000584484 83 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC008687.2-201ENST00000597865 520 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC128687.1-201ENST00000605304 619 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AL355816.1-201ENST00000607951 118 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC068792.1-201ENST00000621354 417 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC135068.5-201ENST00000624197 983 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 AC009313.2-201ENST00000417893 1941 ntBASIC5.05□□□□□ -1.6
RLIMQ9NVW2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.05□□□□□ -1.6
RLIMQ9NVW2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 OR5BR1P-201ENST00000524992 1330 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 RNU6-374P-201ENST00000364146 108 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 RNU6-660P-201ENST00000364566 109 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 RN7SKP6-201ENST00000364795 319 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 Y_RNA.553-201ENST00000384670 102 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 RNU2-65P-201ENST00000410162 185 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 RNU6-648P-201ENST00000410190 107 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 RNU2-18P-201ENST00000411224 162 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 PGBD4P8-201ENST00000412993 562 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 MTCO3P41-201ENST00000414801 328 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 MTCO1P21-201ENST00000416634 589 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC007394.1-201ENST00000421941 531 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC006366.1-201ENST00000422002 759 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 IPPKP1-201ENST00000422501 768 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AL133173.1-201ENST00000423458 397 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC093698.1-201ENST00000423843 571 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 MUPP-201ENST00000438111 566 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AL450996.1-201ENST00000445574 1202 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 RPS15AP1-201ENST00000457423 391 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 RPL7P38-201ENST00000488396 739 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 UBA52P3-201ENST00000491303 382 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 ARL4AP1-201ENST00000503220 705 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 HMGB1P28-201ENST00000507778 552 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC010625.1-201ENST00000511296 403 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 MTCYBP43-201ENST00000513621 740 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 SNORA70.11-201ENST00000515987 138 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 SNORA70.13-201ENST00000516116 138 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 snoU109.6-201ENST00000516831 118 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AL391156.1-201ENST00000554965 554 ntBASIC5.04□□□□□ -1.6
RLIMQ9NVW2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms