Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC174048.1-201ENST00000603389 144 ntBASIC8.73□□□□□ -1.01
RTN4Q9NQC3 LLPHP1-201ENST00000603571 367 ntBASIC8.73□□□□□ -1.01
RTN4Q9NQC3 AL133255.1-201ENST00000606374 441 ntBASIC8.73□□□□□ -1.01
RTN4Q9NQC3 AL133215.3-201ENST00000609801 448 ntBASIC8.73□□□□□ -1.01
RTN4Q9NQC3 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 AC110801.1-201ENST00000623590 212 ntBASIC8.73□□□□□ -1.01
RTN4Q9NQC3 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 AL049555.1-201ENST00000562834 1933 ntBASIC8.73□□□□□ -1.01
RTN4Q9NQC3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RTN4Q9NQC3 TPTE2P4-201ENST00000258589 1605 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 CDY19P-201ENST00000411668 1613 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 MARK2P10-201ENST00000454959 1437 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AL451142.1-201ENST00000375867 775 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 Y_RNA.414-201ENST00000384011 101 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 RNU6-831P-201ENST00000384548 107 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AL049758.1-201ENST00000423154 397 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC083862.1-201ENST00000427378 1242 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 KCTD9P3-201ENST00000434597 1169 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 NDUFA5P4-201ENST00000436704 385 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 MTND4P19-201ENST00000446659 478 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 RN7SL403P-201ENST00000481783 305 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 NDUFS5P2-201ENST00000484004 306 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC108078.2-201ENST00000510750 236 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 MRPL40P1-201ENST00000542687 604 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 SCOCP1-201ENST00000554676 349 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 MIR4458-201ENST00000578872 75 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC024619.3-201ENST00000582196 323 ntTSL 2 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 RN7SL192P-201ENST00000584303 299 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC067796.1-201ENST00000586795 496 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AL121917.2-201ENST00000605044 390 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 IRF5P1-201ENST00000504852 2164 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AL645937.1-201ENST00000641739 1652 ntBASIC8.72□□□□□ -1.01
RTN4Q9NQC3 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RTN4Q9NQC3 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RTN4Q9NQC3 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 RNU6-522P-201ENST00000364497 107 ntBASIC8.71□□□□□ -1.02
RTN4Q9NQC3 AL359634.1-202ENST00000404721 284 ntBASIC8.71□□□□□ -1.02
RTN4Q9NQC3 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 RPL7P10-201ENST00000417407 739 ntBASIC8.71□□□□□ -1.02
RTN4Q9NQC3 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 MTCO2P27-201ENST00000420740 428 ntBASIC8.71□□□□□ -1.02
RTN4Q9NQC3 AC092651.1-201ENST00000426110 312 ntBASIC8.71□□□□□ -1.02
RTN4Q9NQC3 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 ZDHHC20P1-204ENST00000435787 423 ntBASIC8.71□□□□□ -1.02
RTN4Q9NQC3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC8.71□□□□□ -1.02
RTN4Q9NQC3 RPL23AP60-201ENST00000450011 454 ntBASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms