Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC069240.1-201ENST00000548774 375 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC233280.2-201ENST00000603917 1070 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 IQCB2P-201ENST00000401788 1633 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 USP9YP4-201ENST00000424401 1745 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 HMGB3P5-201ENST00000428894 612 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 RPL7P1-201ENST00000468161 747 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 RPL7P9-201ENST00000468715 747 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC091544.1-201ENST00000484702 348 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 VN1R105P-201ENST00000486595 910 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC139783.2-201ENST00000504847 1145 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 MIR432-201ENST00000606207 94 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AL354760.1-201ENST00000608357 643 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 LINC00901.1-201ENST00000617252 152 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 OR8B1P-202ENST00000641132 1178 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 SNORA48.7-201ENST00000391302 135 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 RBMY1KP-201ENST00000423480 476 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AL445584.1-201ENST00000431451 330 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 FCF1P7-201ENST00000451185 558 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 DYNLL1P4-201ENST00000549314 266 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 MIR92B-201ENST00000607575 96 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AC099669.2-201ENST00000616549 437 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 MAPK10-303ENST00000641324 3959 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 MUC2-202ENST00000613187 4845 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 CDC27P2-201ENST00000425026 1922 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 SNORA68.2-201ENST00000391263 128 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 MAPRE1P3-201ENST00000435438 796 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AL589765.3-201ENST00000446084 462 ntBASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.62□□□□□ -1.83
KIAA1549Q9HCM3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 RNU1-108P-201ENST00000362556 161 ntBASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 GSTM3P2-201ENST00000412746 530 ntBASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AC069157.1-201ENST00000421749 137 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms