Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC087468.1-201ENST00000604365 630 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC096553.1-201ENST00000605169 829 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AP003499.2-201ENST00000624100 483 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AL139254.3-201ENST00000641097 674 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
UPF3BQ9BZI7 RLIMP2-201ENST00000427891 1563 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 SNORD74.4-201ENST00000364129 80 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 RN7SKP280-201ENST00000364196 304 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 SNORA70.4-201ENST00000365509 134 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AC069285.2-201ENST00000440210 275 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 HSFY6P-201ENST00000445573 403 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AL358232.1-201ENST00000448030 501 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AC010469.1-201ENST00000463864 576 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 RPL5P30-201ENST00000465511 891 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AL592156.1-201ENST00000508758 304 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AC008958.1-201ENST00000511047 682 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AC023632.4-201ENST00000517783 191 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 OR7E10P-201ENST00000526420 991 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AC090948.2-201ENST00000607363 564 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 AL445567.2-201ENST00000618935 498 ntBASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.96□□□□□ -1.62
UPF3BQ9BZI7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 MIR554-201ENST00000384874 96 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 CASKP1-201ENST00000412870 582 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 AC106901.1-201ENST00000425086 698 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 RAD23BP3-201ENST00000454157 1152 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 RPL7AP52-201ENST00000458096 790 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 AC041039.1-201ENST00000485656 536 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 RPL35P6-201ENST00000490024 372 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 UBTFL9-201ENST00000534504 1148 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 MIR3944-201ENST00000581277 108 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 MIR4444-1-201ENST00000581696 74 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 MIR4444-2-201ENST00000584390 74 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 AL161729.3-201ENST00000603533 673 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 AL356863.1-201ENST00000623378 1080 ntBASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UPF3BQ9BZI7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 MARK2P15-201ENST00000432204 2186 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 OR10J6P-201ENST00000289731 930 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 SNORA11.2-201ENST00000408318 127 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 RNA5SP306-201ENST00000411087 107 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 RCC2P2-201ENST00000422174 918 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 ELOCP8-201ENST00000439309 332 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 ACTR3P2-201ENST00000439585 1257 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 ELOCP15-201ENST00000442090 332 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 RPS7P7-201ENST00000463499 571 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms