Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC025554.1-201ENST00000505641 188 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 KCTD9P2-201ENST00000512203 1013 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 MYL12AP1-201ENST00000518490 515 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AGGF1P6-201ENST00000569213 976 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AC064801.1-201ENST00000612025 407 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AL158196.1-201ENST00000616786 434 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 MIR7151-201ENST00000617477 60 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RPAP1Q9BWH6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 RNA5SP36-201ENST00000410197 133 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 RN7SKP182-201ENST00000410772 298 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AL034379.1-201ENST00000423216 253 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 OR6C71P-201ENST00000432580 913 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AL353748.1-201ENST00000440753 474 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 RN7SL542P-201ENST00000467147 294 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 OR5M7P-201ENST00000526140 972 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC025423.2-201ENST00000537570 439 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC084759.1-201ENST00000561168 290 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC053481.3-201ENST00000577881 843 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC115989.2-201ENST00000578640 563 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC138907.10-201ENST00000623708 983 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC010300.1-201ENST00000600671 5134 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 AC016588.2-201ENST00000632484 3021 ntBASIC5.08□□□□□ -1.6
RPAP1Q9BWH6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 SNORD74.4-201ENST00000364129 80 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 RNA5SP39-201ENST00000411245 120 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 CYCSP19-201ENST00000411715 316 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AC108032.1-201ENST00000416706 207 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 MTCO3P17-201ENST00000443775 513 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AL162151.2-201ENST00000448875 158 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AC016687.1-201ENST00000482574 353 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 RFPL4AP3-201ENST00000515267 345 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 VN1R81P-201ENST00000602085 372 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 MIR432-201ENST00000606207 94 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AC074140.1-201ENST00000621617 208 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AC010608.2-201ENST00000624830 470 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 CUL4AP1-201ENST00000514750 1863 ntBASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RPAP1Q9BWH6 AL356489.2-201ENST00000566968 3528 ntBASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 ATP5F1P3-201ENST00000397213 657 ntBASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 AP001960.1-201ENST00000506494 658 ntBASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 FTH1P21-201ENST00000512179 511 ntBASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 AC027176.2-201ENST00000559166 746 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms