Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.13□□□□□ -1.75
SSX3Q99909 SEC63P2-201ENST00000503863 1939 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.13□□□□□ -1.75
SSX3Q99909 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.13□□□□□ -1.75
SSX3Q99909 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.13□□□□□ -1.75
SSX3Q99909 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
SSX3Q99909 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSX3Q99909 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SSX3Q99909 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.13□□□□□ -1.75
SSX3Q99909 RNU6-543P-201ENST00000362576 108 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 RN7SKP113-201ENST00000363891 295 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 RN7SKP114-201ENST00000410327 279 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 RAC1P3-201ENST00000416129 580 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.13□□□□□ -1.75
SSX3Q99909 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.13□□□□□ -1.75
SSX3Q99909 AL590762.4-201ENST00000425885 253 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.13□□□□□ -1.75
SSX3Q99909 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.13□□□□□ -1.75
SSX3Q99909 AC006994.1-201ENST00000438212 839 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.13□□□□□ -1.75
SSX3Q99909 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSX3Q99909 AL158053.1-201ENST00000441503 453 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AC068135.1-201ENST00000446164 246 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.13□□□□□ -1.75
SSX3Q99909 AC005008.1-201ENST00000456151 612 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.13□□□□□ -1.75
SSX3Q99909 RN7SL443P-201ENST00000464331 290 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AC018635.1-201ENST00000468292 1030 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AC008565.1-201ENST00000509046 885 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.13□□□□□ -1.75
SSX3Q99909 AC083923.1-201ENST00000523708 376 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AC135001.1-201ENST00000544546 283 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.13□□□□□ -1.75
SSX3Q99909 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.13□□□□□ -1.75
SSX3Q99909 ATP5F1P7-201ENST00000567330 760 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 TMF1P1-201ENST00000576058 373 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
SSX3Q99909 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.13□□□□□ -1.75
SSX3Q99909 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.13□□□□□ -1.75
SSX3Q99909 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.13□□□□□ -1.75
SSX3Q99909 BNIP3P35-201ENST00000604530 490 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AC024940.4-201ENST00000605507 246 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AC021851.1-201ENST00000608537 1082 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.13□□□□□ -1.75
SSX3Q99909 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.13□□□□□ -1.75
SSX3Q99909 AC015813.4-201ENST00000610469 179 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AC078899.5-201ENST00000612475 178 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AL590396.2-201ENST00000636511 1041 ntBASIC4.13□□□□□ -1.75
SSX3Q99909 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.13□□□□□ -1.75
SSX3Q99909 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSX3Q99909 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSX3Q99909 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSX3Q99909 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSX3Q99909 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 AC119744.1-201ENST00000454746 1715 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX3Q99909 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 AC053481.2-202ENST00000582394 1500 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 ENSAP3-201ENST00000312710 333 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 RN7SKP104-201ENST00000362605 328 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 OR52E6-202ENST00000379946 954 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 MIR153-1-201ENST00000384914 90 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 RPL23AP59-201ENST00000399415 461 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AL133270.1-201ENST00000402635 279 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 RNA5SP239-201ENST00000410218 129 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX3Q99909 RPL21P108-201ENST00000413857 481 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 TMBIM7P-201ENST00000418074 855 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 EIF4EP1-201ENST00000422311 642 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AC008065.1-201ENST00000428525 348 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 RPL37P1-201ENST00000432310 284 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 PSMD10P3-201ENST00000437000 448 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 KNOP1P3-201ENST00000446933 426 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 SBDSP1-204ENST00000453858 737 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AC108161.1-201ENST00000461060 402 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 RPL23AP2-201ENST00000471227 466 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX3Q99909 TPT1P3-201ENST00000492841 512 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AC231760.1-201ENST00000498002 260 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX3Q99909 AC008494.2-201ENST00000514544 370 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AC112206.4-201ENST00000515142 405 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 AP001922.4-201ENST00000526967 290 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms