Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.2□□□□□ -1.58
ABCA3Q99758 AC012417.1-201ENST00000582307 1039 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 AC002069.2-201ENST00000603580 883 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.2□□□□□ -1.58
ABCA3Q99758 Z82217.1-201ENST00000625157 8149 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ABCA3Q99758 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCA3Q99758 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ABCA3Q99758 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCA3Q99758 HSPD1P11-201ENST00000508643 1702 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ABCA3Q99758 MIR128-1-201ENST00000384921 82 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 SKP1P3-201ENST00000429280 487 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 HIGD1AP4-201ENST00000430194 280 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 AP000563.1-201ENST00000490865 758 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCA3Q99758 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCA3Q99758 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCA3Q99758 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCA3Q99758 MTND1P6-201ENST00000523621 946 ntBASIC5.2□□□□□ -1.58
ABCA3Q99758 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.2□□□□□ -1.58
ABCA3Q99758 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.2□□□□□ -1.58
ABCA3Q99758 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.2□□□□□ -1.58
ABCA3Q99758 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
ABCA3Q99758 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ABCA3Q99758 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ABCA3Q99758 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCA3Q99758 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCA3Q99758 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.19□□□□□ -1.58
ABCA3Q99758 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCA3Q99758 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
ABCA3Q99758 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.19□□□□□ -1.58
ABCA3Q99758 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.19□□□□□ -1.58
ABCA3Q99758 AC073387.1-201ENST00000453261 709 ntBASIC5.19□□□□□ -1.58
ABCA3Q99758 AC104849.1-201ENST00000462623 405 ntBASIC5.19□□□□□ -1.58
ABCA3Q99758 AL591473.1-201ENST00000464297 313 ntBASIC5.19□□□□□ -1.58
ABCA3Q99758 AC006517.1-201ENST00000480485 328 ntBASIC5.19□□□□□ -1.58
ABCA3Q99758 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.19□□□□□ -1.58
ABCA3Q99758 AC107993.1-201ENST00000591343 684 ntBASIC5.19□□□□□ -1.58
ABCA3Q99758 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.19□□□□□ -1.58
ABCA3Q99758 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.19□□□□□ -1.58
ABCA3Q99758 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ABCA3Q99758 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ABCA3Q99758 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
ABCA3Q99758 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ABCA3Q99758 AC120036.2-201ENST00000509729 1474 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
ABCA3Q99758 RBMY1KP-201ENST00000423480 476 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 RPL23AP12-201ENST00000467573 473 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 HMGN1P11-201ENST00000508668 303 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.18□□□□□ -1.58
ABCA3Q99758 RN7SKP57-201ENST00000517248 293 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 AC024224.1-201ENST00000538284 609 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.18□□□□□ -1.58
ABCA3Q99758 AC079880.2-201ENST00000603790 1213 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 AC124312.6-202ENST00000623624 418 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ABCA3Q99758 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
ABCA3Q99758 AC092435.3-201ENST00000565538 3654 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 AC003985.2-201ENST00000562268 1669 ntBASIC5.18□□□□□ -1.58
ABCA3Q99758 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.17□□□□□ -1.58
ABCA3Q99758 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.17□□□□□ -1.58
ABCA3Q99758 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCA3Q99758 AC067945.1-201ENST00000342609 618 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.17□□□□□ -1.58
ABCA3Q99758 AC117434.1-201ENST00000419971 836 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.17□□□□□ -1.58
ABCA3Q99758 UBDP1-202ENST00000457888 382 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCA3Q99758 SNORA70.18-201ENST00000516696 98 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.17□□□□□ -1.58
ABCA3Q99758 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.17□□□□□ -1.58
ABCA3Q99758 MIR8057-201ENST00000620957 69 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.17□□□□□ -1.58
ABCA3Q99758 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ABCA3Q99758 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCA3Q99758 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.17□□□□□ -1.58
ABCA3Q99758 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.17□□□□□ -1.58
ABCA3Q99758 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
ABCA3Q99758 AL672167.1-203ENST00000641299 2975 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCA3Q99758 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCA3Q99758 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.17□□□□□ -1.58
ABCA3Q99758 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ABCA3Q99758 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ABCA3Q99758 RPL7P60-201ENST00000397636 735 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 NPM1P37-201ENST00000403105 874 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 BX119904.3-201ENST00000428194 957 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.17□□□□□ -1.58
ABCA3Q99758 RPS29P2-201ENST00000479278 136 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 AC090136.1-201ENST00000520009 240 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 AC022695.1-201ENST00000522089 237 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 AC007599.1-201ENST00000568688 1174 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.17□□□□□ -1.58
ABCA3Q99758 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.17□□□□□ -1.58
ABCA3Q99758 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.17□□□□□ -1.58
ABCA3Q99758 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ABCA3Q99758 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ABCA3Q99758 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms