Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 AL713922.2-201ENST00000619384 716 ntBASIC3.77□□□□□ -1.81
VPS13AQ96RL7 AC079684.1-201ENST00000621405 437 ntBASIC3.77□□□□□ -1.81
VPS13AQ96RL7 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 OOSP1P1-201ENST00000423265 274 ntBASIC3.77□□□□□ -1.81
VPS13AQ96RL7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 PHBP14-201ENST00000512887 367 ntBASIC3.77□□□□□ -1.81
VPS13AQ96RL7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS13AQ96RL7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 RANP8-201ENST00000444720 713 ntBASIC3.76□□□□□ -1.81
VPS13AQ96RL7 AL671855.1-201ENST00000446875 1203 ntBASIC3.76□□□□□ -1.81
VPS13AQ96RL7 MTND6P32-201ENST00000457611 483 ntBASIC3.76□□□□□ -1.81
VPS13AQ96RL7 AC025627.2-201ENST00000576220 160 ntBASIC3.76□□□□□ -1.81
VPS13AQ96RL7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.76□□□□□ -1.81
VPS13AQ96RL7 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 AC126323.6-202ENST00000568092 3511 ntBASIC3.76□□□□□ -1.81
VPS13AQ96RL7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 EI24P3-201ENST00000399046 1062 ntBASIC3.76□□□□□ -1.81
VPS13AQ96RL7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 AC011825.1-201ENST00000484967 388 ntBASIC3.76□□□□□ -1.81
VPS13AQ96RL7 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 IMMP1LP1-201ENST00000605170 488 ntBASIC3.76□□□□□ -1.81
VPS13AQ96RL7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 AC022893.2-201ENST00000564832 3296 ntBASIC3.76□□□□□ -1.81
VPS13AQ96RL7 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13AQ96RL7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 Z97055.1-201ENST00000419730 712 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 KC877373.1-201ENST00000479066 408 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AC087369.1-201ENST00000520775 996 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 MIR5186-201ENST00000577504 120 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 MIR5004-201ENST00000579078 107 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AC009303.3-201ENST00000591103 736 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AL161631.1-201ENST00000417933 486 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 RNF19BPX-201ENST00000426224 625 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AC008065.1-201ENST00000428525 348 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 RPL7P59-201ENST00000447700 943 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 RBMY2UP-201ENST00000453474 324 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 SNORD105B-201ENST00000458770 79 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AC006023.1-201ENST00000603944 259 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AL133268.1-201ENST00000405676 1401 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 RNA5SP175-201ENST00000364275 119 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 UBE2V1P1-201ENST00000430836 445 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 RPL26P28-201ENST00000451325 435 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AP005264.7-201ENST00000625003 745 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 AC004944.1-201ENST00000517807 3059 ntBASIC3.75□□□□□ -1.81
VPS13AQ96RL7 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms