Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SYNGAP1Q96PV0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SYNGAP1Q96PV0 MTND4P16-201ENST00000466108 1367 ntBASIC6.59□□□□□ -1.36
SYNGAP1Q96PV0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.59□□□□□ -1.36
SYNGAP1Q96PV0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC017104.4-201ENST00000636283 1592 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 Y_RNA.9-201ENST00000362354 101 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 RN7SKP59-201ENST00000410520 314 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AL365184.2-201ENST00000431139 435 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC023141.8-201ENST00000442554 208 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 CYCSP51-201ENST00000443545 318 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 DNAJC19P8-201ENST00000452887 259 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 HSPE1P22-201ENST00000456856 327 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC073522.1-201ENST00000483312 377 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 RPL7P24-201ENST00000493052 752 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 ARL4AP2-201ENST00000507378 601 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 HMGB1P44-201ENST00000508597 572 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AP005639.2-201ENST00000527592 928 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 RAB11AP2-201ENST00000545905 639 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC068870.2-201ENST00000620635 389 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC112204.3-201ENST00000623822 332 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC135352.1-201ENST00000506173 1418 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 SRRM1P3-201ENST00000426911 2678 ntBASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNGAP1Q96PV0 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 Y_RNA.450-201ENST00000384198 113 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AL034403.1-201ENST00000399414 885 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 RNU2-65P-201ENST00000410162 185 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AL357752.1-201ENST00000412817 349 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AL139128.1-201ENST00000413921 941 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 MTCYBP24-201ENST00000420387 1106 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AC007742.1-201ENST00000425789 329 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 ELOCP26-201ENST00000436067 329 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 MTCO3P18-201ENST00000440206 761 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AL390119.1-201ENST00000440329 312 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 MTND1P11-201ENST00000456661 876 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 RPL38P3-201ENST00000484463 213 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 STMN1P2-201ENST00000508435 439 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AC004217.3-201ENST00000551552 878 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AC015720.2-201ENST00000567709 334 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AL390838.2-201ENST00000602394 274 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AC107214.2-201ENST00000608204 634 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AL121890.2-201ENST00000617644 465 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AC079228.1-201ENST00000624774 1049 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms