Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC073091.2-201ENST00000603205 907 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AL031320.1-201ENST00000604177 357 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 MIR6826-201ENST00000617808 98 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC010809.3-201ENST00000621310 641 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 OR2L1P-202ENST00000641567 1023 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 OR5AC4P-202ENST00000642086 985 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC066616.2-201ENST00000559334 1481 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 MAPK10-253ENST00000641010 4072 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 OR10AB1P-202ENST00000641219 1686 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 RNA5SP175-201ENST00000364275 119 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 RNU4-7P-201ENST00000364758 141 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 MIR3065-201ENST00000390137 79 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 SNORD66.1-201ENST00000391230 76 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 RNA5SP397-201ENST00000391323 118 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 MTCO3P31-201ENST00000405526 789 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC073069.1-201ENST00000428657 441 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AL353093.1-201ENST00000441292 436 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AL162151.2-201ENST00000448875 158 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC025554.1-201ENST00000505641 188 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC006064.5-201ENST00000541782 248 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC090888.3-201ENST00000558917 509 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 MIR5047-201ENST00000579212 100 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC022467.1-201ENST00000614738 749 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC087385.3-201ENST00000620477 187 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.12□□□□□ -1.91
AP1S3Q96PC3 AC006504.1-201ENST00000562493 3666 ntBASIC3.12□□□□□ -1.91
AP1S3Q96PC3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 C4BPAP1-201ENST00000415474 1893 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AP000357.1-201ENST00000409926 1165 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC098592.2-201ENST00000413158 265 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AP001324.1-201ENST00000428553 399 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 ARF4P2-201ENST00000430209 526 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 MTCO3P16-201ENST00000454456 754 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC091685.2-201ENST00000454924 864 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 RPL7P48-201ENST00000461513 746 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AP000873.1-201ENST00000463987 400 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 RPL35AP15-201ENST00000468042 339 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 SEPT7P6-201ENST00000469999 1143 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 RPL7AP6-201ENST00000477943 801 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC011005.3-201ENST00000491624 395 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 RPL23AP72-201ENST00000492447 435 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC104164.2-201ENST00000496953 495 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC010374.1-201ENST00000503762 1237 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC010627.1-201ENST00000503819 1294 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms