Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 NDUFB4P12-201ENST00000513465 390 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC008676.3-201ENST00000521237 435 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 OR5BC1P-201ENST00000529327 739 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC009643.1-201ENST00000532030 391 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC068831.4-201ENST00000556118 109 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 MIR4277-201ENST00000578298 84 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 MIR4284-201ENST00000578924 81 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC084373.1-201ENST00000603311 235 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC113403.1-201ENST00000604910 193 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC025175.1-201ENST00000606482 759 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC092159.4-201ENST00000624944 550 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 BMS1P21-201ENST00000634565 365 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 IQCB2P-201ENST00000401788 1633 ntBASIC4.03□□□□□ -1.77
COL21A1Q96P44 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 BX005019.1-201ENST00000561881 1810 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL21A1Q96P44 RNU4-39P-201ENST00000362455 127 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL21A1Q96P44 AC019155.1-201ENST00000382242 574 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 RNU6-178P-201ENST00000384631 104 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 U3.22-201ENST00000391120 215 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 HSPD1P16-201ENST00000402302 394 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 AL161631.1-201ENST00000417933 486 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 AL139095.3-201ENST00000419672 1203 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 RBMY1KP-201ENST00000423480 476 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 AL732292.1-201ENST00000426692 226 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 MTND2P2-201ENST00000434633 945 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 PTMAP3-201ENST00000447474 330 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 RPL10P17-201ENST00000453852 316 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 RN7SL585P-201ENST00000470538 280 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 RPS27AP16-201ENST00000492222 470 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 AC083829.1-201ENST00000503756 657 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 AC010476.1-201ENST00000519111 851 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 OR8G5-201ENST00000524943 1041 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 AL021997.2-201ENST00000615674 271 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 AC140479.6-201ENST00000633535 357 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.02□□□□□ -1.77
COL21A1Q96P44 PHKBP1-201ENST00000450951 1951 ntBASIC4.02□□□□□ -1.77
COL21A1Q96P44 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 RNU6-386P-201ENST00000362650 107 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 RNA5SP175-201ENST00000364275 119 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 RNU6-670P-201ENST00000364312 104 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 EIF1P3-201ENST00000423841 334 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC023141.6-201ENST00000429418 337 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 RPS29P17-201ENST00000430795 166 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AL157884.3-201ENST00000448273 1184 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC011276.1-201ENST00000469688 323 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 RN7SL481P-201ENST00000477764 299 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC108145.1-201ENST00000503770 153 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 OR7E10P-201ENST00000526420 991 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms