Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AL359715.5-201ENST00000623431 443 ntBASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CLDND2Q8NHS1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 RNU6-673P-201ENST00000365084 104 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AL391219.1-201ENST00000422570 483 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 EIF1P3-201ENST00000423841 334 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AF186190.1-201ENST00000517470 480 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 OR8R1P-201ENST00000543943 764 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AL352979.3-201ENST00000553515 247 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AGGF1P6-201ENST00000569213 976 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AC087468.1-201ENST00000604365 630 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AC012603.1-201ENST00000606424 528 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AC016252.1-201ENST00000609721 474 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 AC112484.5-201ENST00000624189 228 ntBASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDND2Q8NHS1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 AC017007.4-201ENST00000503353 1352 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RNU1-64P-201ENST00000365443 163 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 SNORA37-201ENST00000384504 129 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 MIR708-201ENST00000390708 88 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RNU6-1320P-201ENST00000390838 107 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RNU6-1269P-201ENST00000391139 107 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RPL23AP48-201ENST00000406913 488 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RN7SKP182-201ENST00000410772 298 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 AL590806.1-201ENST00000415818 853 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 AC106901.1-201ENST00000425086 698 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 YY1P1-201ENST00000427625 668 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 HMGB3P22-202ENST00000451823 572 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RNU6-599P-201ENST00000459383 107 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RNU6-1193P-201ENST00000459461 107 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RPL7P22-201ENST00000466005 733 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RPL23AP71-201ENST00000470966 469 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RNA5SP73-201ENST00000516744 108 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 AC106785.1-201ENST00000565935 262 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 MIR1254-2-201ENST00000579553 63 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 RN7SL600P-201ENST00000581811 299 ntBASIC3.56□□□□□ -1.84
CLDND2Q8NHS1 AC006116.5-201ENST00000591936 559 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms