Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL365396.1-201ENST00000430854 671 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 NFYAP1-201ENST00000431953 972 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AC083829.1-201ENST00000503756 657 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 HPRT1P2-201ENST00000505250 544 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 IGBP1P5-201ENST00000507524 1000 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AP001781.1-201ENST00000530977 207 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 MIR4277-201ENST00000578298 84 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AC069061.3-201ENST00000582254 823 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AL354984.3-201ENST00000604803 325 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AL356218.2-201ENST00000605264 187 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 MIR6758-201ENST00000620653 63 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AC002044.3-201ENST00000623314 541 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AC016717.3-201ENST00000624730 554 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AC008013.2-202ENST00000637965 364 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AL132640.2-201ENST00000559968 1698 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AL592148.3-201ENST00000608771 2646 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC093535.2-201ENST00000624769 2326 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC233968.1-201ENST00000611212 1300 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC008033.1-201ENST00000216407 1162 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 OR11H4-201ENST00000315409 1082 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 IGKV7-3-201ENST00000357453 298 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 RNU6-984P-201ENST00000363236 109 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AL589994.1-201ENST00000404962 340 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 PGBD4P8-201ENST00000412993 562 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 P2RY10P2-201ENST00000416730 913 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 IFNNP1-201ENST00000429219 553 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AL357520.1-201ENST00000441557 453 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 RPL36AP13-201ENST00000457490 317 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 OR52A4P-201ENST00000472867 958 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 MTND2P17-201ENST00000550281 688 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC136624.4-201ENST00000573044 370 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC110741.2-201ENST00000605278 268 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC092653.1-201ENST00000608509 531 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC112Q8NEF3 OR56B2P-202ENST00000641377 2453 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 OR6K4P-201ENST00000423179 955 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 RPL23AP1-201ENST00000428990 471 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 NDUFA5P1-201ENST00000433858 341 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 RPS26P40-201ENST00000435209 294 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AL512326.1-201ENST00000443050 721 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AL162388.1-201ENST00000450912 352 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 CEACAMP6-201ENST00000452007 574 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 RPS29P19-201ENST00000479709 171 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AC005191.1-201ENST00000603950 358 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AP000255.1-201ENST00000610276 676 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms