Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TCEA1P2-201ENST00000420496 906 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 AL500522.2-201ENST00000448562 343 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 AL133162.1-201ENST00000463228 453 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 AL133372.1-201ENST00000493565 745 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 AC093853.1-201ENST00000515689 483 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 MIR4429-201ENST00000580105 73 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 AC005344.1-201ENST00000613391 459 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 AL121772.2-201ENST00000614331 297 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 AC112200.1-201ENST00000625015 234 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 TRIM60P17-201ENST00000415181 719 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 TRGV7-201ENST00000427089 353 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 NPM1P34-201ENST00000428821 893 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 KCTD9P3-201ENST00000434597 1169 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 AL133547.1-201ENST00000448546 220 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 RN7SL132P-201ENST00000478131 296 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 GAPDHP36-201ENST00000480688 918 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 AC090877.1-201ENST00000561418 344 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 AC008638.3-201ENST00000603341 463 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 RNU1-30P-201ENST00000606575 163 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 AC099669.2-201ENST00000616549 437 ntBASIC6.06□□□□□ -1.44
VPS8Q8N3P4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS8Q8N3P4 AC007998.4-201ENST00000612496 2533 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 ELOCP18-201ENST00000434209 337 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 AC069285.2-201ENST00000440210 275 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 Z95327.1-201ENST00000446082 482 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 RPL21P11-201ENST00000461458 483 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 RN7SKP141-201ENST00000516167 338 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 SNORA67.7-201ENST00000516664 135 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 IGHV3-63-201ENST00000518422 341 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 HMGB1P23-201ENST00000518743 568 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 AC016839.1-201ENST00000578162 867 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 MIR4444-1-201ENST00000581696 74 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 MIR4444-2-201ENST00000584390 74 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 AC006133.1-201ENST00000617106 264 ntBASIC6.05□□□□□ -1.44
VPS8Q8N3P4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
VPS8Q8N3P4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AL591419.1-201ENST00000427423 339 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AL035246.1-201ENST00000433554 1255 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AC007688.1-201ENST00000475592 759 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 SLC25A15P5-201ENST00000508033 253 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 MTCO1P49-201ENST00000523429 802 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 HNRNPCP4-201ENST00000571636 900 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AP005262.1-201ENST00000582646 997 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AL049634.3-201ENST00000604968 457 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 AL591424.2-201ENST00000617023 128 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 CYP1D1P-201ENST00000416662 1433 ntBASIC6.04□□□□□ -1.44
VPS8Q8N3P4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
VPS8Q8N3P4 IPO8P1-201ENST00000455509 3109 ntBASIC6.03□□□□□ -1.44
VPS8Q8N3P4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms