Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 AC007996.1-201ENST00000620414 2821 ntBASIC7.28□□□□□ -1.24
SCUBE3Q8IX30 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AL137058.3-201ENST00000624531 3099 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC004972.1-201ENST00000623934 2209 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 Y_RNA.252-201ENST00000364556 101 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 RNU6-310P-201ENST00000384655 107 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 RNA5SP176-201ENST00000390956 110 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 RNU6-1109P-201ENST00000391187 107 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 SOD2P1-201ENST00000396543 562 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 TPMTP2-201ENST00000414372 726 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 DUTP4-201ENST00000424782 475 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC137499.1-201ENST00000427602 88 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 MYL6P3-201ENST00000436904 432 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 HMGB3P11-201ENST00000440127 604 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AL450996.1-201ENST00000445574 1202 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AL392103.1-201ENST00000447000 198 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC073909.1-201ENST00000447112 999 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 RN7SL168P-201ENST00000463821 279 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 RPS20P21-201ENST00000466859 343 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC083806.1-201ENST00000468934 316 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 RN7SL868P-201ENST00000485915 303 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 SUMO2P4-201ENST00000504193 276 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 RFPL4AP3-201ENST00000515267 345 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 HAUS8P1-201ENST00000549005 542 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AL391813.2-201ENST00000609113 322 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 THUMPD3P1-201ENST00000506556 1480 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AL161912.4-201ENST00000623889 2468 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 AC007998.4-201ENST00000612496 2533 ntBASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
SCUBE3Q8IX30 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 TATDN2P3-201ENST00000452855 3665 ntBASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 AC092125.1-201ENST00000562568 1995 ntBASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 AC005839.1-201ENST00000624148 3213 ntBASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 NLRP3P1-201ENST00000622303 1785 ntBASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 OR2AH1P-202ENST00000641232 2744 ntBASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SCUBE3Q8IX30 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms