Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC010975.2-201ENST00000427781 588 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC122718.1-201ENST00000439448 744 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 USP9YP29-201ENST00000445112 563 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 RPL21P134-201ENST00000453468 483 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 FAM133DP-201ENST00000464802 691 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC073358.1-201ENST00000505671 684 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC118273.2-201ENST00000532092 465 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC007954.1-201ENST00000554198 494 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC011626.1-201ENST00000604710 562 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC091965.4-201ENST00000607691 587 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC025594.3-201ENST00000613068 790 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AL512624.1-201ENST00000613638 469 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 MIR6837-201ENST00000620884 64 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC015722.2-201ENST00000622210 551 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AL356596.1-201ENST00000624230 379 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC097063.1-201ENST00000426714 1797 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AL034549.2-201ENST00000618285 3373 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 MAPK10-338ENST00000641647 3362 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VRK3Q8IV63 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK3Q8IV63 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VRK3Q8IV63 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC092447.7-201ENST00000422212 1621 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK3Q8IV63 OR4G2P-201ENST00000328113 903 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 RNU1-19P-201ENST00000363306 165 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 OR1L6-202ENST00000373684 1044 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 RNU6-171P-201ENST00000384354 107 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 SNORA67-201ENST00000384423 137 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 MTCO3P31-201ENST00000405526 789 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 RN7SKP229-201ENST00000410465 302 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 RNU2-66P-201ENST00000410650 161 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 RPS26P13-201ENST00000419030 330 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 PAICSP7-201ENST00000419829 962 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 FNDC3CP-201ENST00000420795 1155 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC108075.1-201ENST00000424692 529 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 RPL21P43-201ENST00000425440 472 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 MTND1P2-201ENST00000430604 821 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AL035458.1-201ENST00000433096 585 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 RPL12P18-201ENST00000437175 325 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 ELOCP10-201ENST00000440624 327 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 CDC42P1-201ENST00000456658 548 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 COPS8P2-201ENST00000473228 627 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC037198.2-201ENST00000478845 733 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 RPL7P18-201ENST00000478965 734 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 RN7SL814P-201ENST00000487715 300 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 MYL12BP2-201ENST00000503948 512 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 372.7 ms