Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AF287957.1-201ENST00000607368 1595 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 COL6A4P1-202ENST00000487147 4317 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 RNU6-1309P-201ENST00000363305 108 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 Y_RNA.231-201ENST00000364358 102 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 Y_RNA.401-201ENST00000383965 117 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 RNU6-1105P-201ENST00000384774 107 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AL583835.1-201ENST00000399570 407 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 RNU4-26P-201ENST00000410270 107 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 RN7SKP271-201ENST00000410528 320 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 HSPE1P1-201ENST00000421494 318 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 ERLEC1P1-201ENST00000433806 578 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AL445466.1-201ENST00000448432 357 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AP006222.1-205ENST00000450734 457 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 PPIAP7-201ENST00000454070 489 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AL356010.1-201ENST00000456364 102 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 RN7SL834P-201ENST00000461450 286 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 SUMO2P4-201ENST00000504193 276 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC114781.3-201ENST00000512083 142 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 TTC39CP1-201ENST00000512513 755 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 RN7SKP2-201ENST00000517003 319 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AP000620.1-201ENST00000527147 504 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AP003497.1-201ENST00000528472 562 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC091078.2-201ENST00000557145 559 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC009597.2-201ENST00000604659 592 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 SNORA74.4-201ENST00000607595 199 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC005899.7-201ENST00000618199 588 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AL133216.2-202ENST00000634512 349 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 TRIM51GP-201ENST00000534741 1350 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC022031.1-201ENST00000585985 2593 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 KPNA2P2-201ENST00000419546 1489 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 AC104581.5-201ENST00000624171 7141 ntBASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.28□□□□□ -1.24
PRPF38BQ5VTL8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
PRPF38BQ5VTL8 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 Y_RNA.133-201ENST00000363428 110 ntBASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 SNORA22B-201ENST00000383876 138 ntBASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 RNU6-831P-201ENST00000384548 107 ntBASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 RNU6-225P-201ENST00000384613 103 ntBASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 NUP35P1-201ENST00000422734 947 ntBASIC7.27□□□□□ -1.25
PRPF38BQ5VTL8 AC083862.1-201ENST00000427378 1242 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms