Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 ASNSP1-201ENST00000518311 1939 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 HSPD1P11-201ENST00000508643 1702 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AL356317.1-201ENST00000396110 1436 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 RNA5SP513-201ENST00000364648 118 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 OR8G2P-201ENST00000412796 908 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 CCNHP1-201ENST00000513311 678 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 RN7SKP122-201ENST00000515923 296 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 RNU4-18P-201ENST00000516751 149 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AF186190.1-201ENST00000517470 480 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 MRPL49P2-201ENST00000521066 465 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC138701.1-201ENST00000524329 714 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC090312.1-201ENST00000580637 348 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC119501.1-201ENST00000603646 475 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC012603.1-201ENST00000606424 528 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AL592494.3-201ENST00000609485 464 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 NF1P10-201ENST00000613227 742 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC090246.1-201ENST00000616499 426 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AL158196.1-201ENST00000616786 434 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 AC090971.4-201ENST00000560291 1800 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 BX005019.1-201ENST00000561881 1810 ntBASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN20Q4JDL3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 ZNF962P-201ENST00000443465 3140 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 OR10J6P-201ENST00000289731 930 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC068538.1-201ENST00000376856 336 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 LAP3P1-201ENST00000403648 294 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC093084.1-201ENST00000424233 687 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 RPL23AP4-201ENST00000427757 463 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AL356276.2-201ENST00000435919 558 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 NDUFA5P9-201ENST00000472609 340 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 HMGB3P13-201ENST00000511263 607 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 SNORD116-30-201ENST00000516468 85 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 UBTFL9-201ENST00000534504 1148 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC025884.1-201ENST00000556034 378 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC018552.3-201ENST00000567416 561 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 SNX6P1-201ENST00000601728 1224 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 MIR6716-201ENST00000613413 80 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 AC083809.1-201ENST00000615051 472 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 MIR6830-201ENST00000636015 70 ntBASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN20Q4JDL3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms