Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL672167.1-204ENST00000641875 3017 ntBASIC4.59□□□□□ -1.68
LTBQ06643 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
LTBQ06643 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.58□□□□□ -1.68
LTBQ06643 AL731566.1-201ENST00000620490 1937 ntBASIC4.58□□□□□ -1.68
LTBQ06643 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.58□□□□□ -1.68
LTBQ06643 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LTBQ06643 MTND4P10-201ENST00000446199 1363 ntBASIC4.58□□□□□ -1.68
LTBQ06643 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LTBQ06643 SNORD113-6-201ENST00000363345 75 ntBASIC4.58□□□□□ -1.68
LTBQ06643 SNORA70.2-201ENST00000364506 135 ntBASIC4.58□□□□□ -1.68
LTBQ06643 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.58□□□□□ -1.68
LTBQ06643 RNU6-224P-201ENST00000384055 107 ntBASIC4.58□□□□□ -1.68
LTBQ06643 RNU6-932P-201ENST00000391108 106 ntBASIC4.58□□□□□ -1.68
LTBQ06643 FCF1P5-201ENST00000406490 482 ntBASIC4.58□□□□□ -1.68
LTBQ06643 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LTBQ06643 P2RY10P2-201ENST00000416730 913 ntBASIC4.58□□□□□ -1.68
LTBQ06643 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 SEPT2P1-201ENST00000419651 180 ntBASIC4.58□□□□□ -1.68
LTBQ06643 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 AC005345.1-201ENST00000431868 217 ntBASIC4.58□□□□□ -1.68
LTBQ06643 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.58□□□□□ -1.68
LTBQ06643 UBE2D3P1-201ENST00000436669 444 ntBASIC4.58□□□□□ -1.68
LTBQ06643 MTND1P34-201ENST00000438556 671 ntBASIC4.58□□□□□ -1.68
LTBQ06643 AL445567.1-201ENST00000439121 144 ntBASIC4.58□□□□□ -1.68
LTBQ06643 ARAFP2-201ENST00000440565 559 ntBASIC4.58□□□□□ -1.68
LTBQ06643 EXTL2P1-201ENST00000446218 416 ntBASIC4.58□□□□□ -1.68
LTBQ06643 MTCO2P7-201ENST00000446518 666 ntBASIC4.58□□□□□ -1.68
LTBQ06643 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.58□□□□□ -1.68
LTBQ06643 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBQ06643 HMGB1P5-202ENST00000451497 985 ntBASIC4.58□□□□□ -1.68
LTBQ06643 AC073387.1-201ENST00000453261 709 ntBASIC4.58□□□□□ -1.68
LTBQ06643 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBQ06643 RPS4XP12-201ENST00000461747 709 ntBASIC4.58□□□□□ -1.68
LTBQ06643 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.58□□□□□ -1.68
LTBQ06643 AC096741.1-201ENST00000472250 846 ntBASIC4.58□□□□□ -1.68
LTBQ06643 AL161747.1-201ENST00000480068 358 ntBASIC4.58□□□□□ -1.68
LTBQ06643 RN7SL441P-201ENST00000492388 296 ntBASIC4.58□□□□□ -1.68
LTBQ06643 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.58□□□□□ -1.68
LTBQ06643 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.58□□□□□ -1.68
LTBQ06643 AC008837.1-201ENST00000511513 412 ntBASIC4.58□□□□□ -1.68
LTBQ06643 AC117532.1-201ENST00000514638 323 ntBASIC4.58□□□□□ -1.68
LTBQ06643 RNU6-1129P-201ENST00000515964 104 ntBASIC4.58□□□□□ -1.68
LTBQ06643 FTH1P11-201ENST00000517577 551 ntBASIC4.58□□□□□ -1.68
LTBQ06643 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.58□□□□□ -1.68
LTBQ06643 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.58□□□□□ -1.68
LTBQ06643 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LTBQ06643 AC068993.1-201ENST00000546724 589 ntBASIC4.58□□□□□ -1.68
LTBQ06643 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBQ06643 AC015688.2-201ENST00000584523 262 ntBASIC4.58□□□□□ -1.68
LTBQ06643 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBQ06643 AC119751.7-201ENST00000600494 245 ntBASIC4.58□□□□□ -1.68
LTBQ06643 MTCO2P22-201ENST00000603246 681 ntBASIC4.58□□□□□ -1.68
LTBQ06643 AC025175.1-201ENST00000606482 759 ntBASIC4.58□□□□□ -1.68
LTBQ06643 BX005214.3-202ENST00000619809 325 ntBASIC4.58□□□□□ -1.68
LTBQ06643 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBQ06643 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LTBQ06643 AC092608.3-201ENST00000625017 386 ntBASIC4.58□□□□□ -1.68
LTBQ06643 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBQ06643 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
LTBQ06643 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBQ06643 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LTBQ06643 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.58□□□□□ -1.68
LTBQ06643 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LTBQ06643 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
LTBQ06643 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LTBQ06643 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.58□□□□□ -1.68
LTBQ06643 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.58□□□□□ -1.68
LTBQ06643 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBQ06643 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 DDX18P5-201ENST00000534547 1306 ntBASIC4.57□□□□□ -1.68
LTBQ06643 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LTBQ06643 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 RN7SKP104-201ENST00000362605 328 ntBASIC4.57□□□□□ -1.68
LTBQ06643 SNORA17.1-201ENST00000362945 126 ntBASIC4.57□□□□□ -1.68
LTBQ06643 RNU4-51P-201ENST00000364206 140 ntBASIC4.57□□□□□ -1.68
LTBQ06643 SNORD116-9-201ENST00000384000 95 ntBASIC4.57□□□□□ -1.68
LTBQ06643 RNU6-398P-201ENST00000384143 109 ntBASIC4.57□□□□□ -1.68
LTBQ06643 SNORD116-3-201ENST00000384287 95 ntBASIC4.57□□□□□ -1.68
LTBQ06643 SNORD116-7-201ENST00000384404 95 ntBASIC4.57□□□□□ -1.68
LTBQ06643 SNORD116-5-201ENST00000384462 95 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms