Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 PSMB7P1-201ENST00000556349 514 ntBASIC5.66□□□□□ -1.5
CALD1Q05682 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.66□□□□□ -1.5
CALD1Q05682 HMGB3P26-201ENST00000560051 582 ntBASIC5.66□□□□□ -1.5
CALD1Q05682 AC068790.5-201ENST00000602741 355 ntBASIC5.66□□□□□ -1.5
CALD1Q05682 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.66□□□□□ -1.5
CALD1Q05682 AP004372.1-201ENST00000604842 844 ntBASIC5.66□□□□□ -1.5
CALD1Q05682 AC078899.5-201ENST00000612475 178 ntBASIC5.66□□□□□ -1.5
CALD1Q05682 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.66□□□□□ -1.5
CALD1Q05682 AL354696.1-201ENST00000614652 497 ntBASIC5.66□□□□□ -1.5
CALD1Q05682 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CALD1Q05682 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.66□□□□□ -1.5
CALD1Q05682 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CALD1Q05682 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.66□□□□□ -1.5
CALD1Q05682 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CALD1Q05682 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CALD1Q05682 AC007342.7-201ENST00000624610 2337 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CALD1Q05682 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CALD1Q05682 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CALD1Q05682 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CALD1Q05682 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CALD1Q05682 RNU6-31P-201ENST00000384388 108 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 AC097374.1-203ENST00000400783 485 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 MIR1911-201ENST00000410783 80 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.65□□□□□ -1.5
CALD1Q05682 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CALD1Q05682 RBMY1KP-201ENST00000423480 476 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 AC016712.1-201ENST00000431088 378 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 NDUFA5P10-201ENST00000432147 357 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 RPEP2-201ENST00000432149 701 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.65□□□□□ -1.5
CALD1Q05682 NPM1P39-201ENST00000449818 867 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 RPL10P17-201ENST00000453852 316 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 RPL35P6-201ENST00000490024 372 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.65□□□□□ -1.5
CALD1Q05682 CDH12P2-201ENST00000504393 298 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 AC093770.1-201ENST00000511559 571 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.65□□□□□ -1.5
CALD1Q05682 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.65□□□□□ -1.5
CALD1Q05682 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.65□□□□□ -1.5
CALD1Q05682 AC005034.4-201ENST00000603612 899 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 AL139395.1-201ENST00000603662 160 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 AL138721.1-201ENST00000616756 179 ntBASIC5.65□□□□□ -1.5
CALD1Q05682 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CALD1Q05682 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CALD1Q05682 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.65□□□□□ -1.51
CALD1Q05682 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CALD1Q05682 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CALD1Q05682 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CALD1Q05682 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CALD1Q05682 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CALD1Q05682 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CALD1Q05682 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CALD1Q05682 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CALD1Q05682 RNU6-40P-201ENST00000384254 107 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 RN7SKP167-201ENST00000411047 285 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.64□□□□□ -1.51
CALD1Q05682 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.64□□□□□ -1.51
CALD1Q05682 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.64□□□□□ -1.51
CALD1Q05682 CEACAMP1-201ENST00000434624 1035 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 RPS3AP54-201ENST00000435535 734 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.64□□□□□ -1.51
CALD1Q05682 AC009963.2-201ENST00000453431 138 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 RPL23AP81-201ENST00000455252 467 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.64□□□□□ -1.51
CALD1Q05682 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.64□□□□□ -1.51
CALD1Q05682 NDUFA5P9-201ENST00000472609 340 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
CALD1Q05682 HIGD1AP5-201ENST00000529959 259 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.64□□□□□ -1.51
CALD1Q05682 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.64□□□□□ -1.51
CALD1Q05682 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.64□□□□□ -1.51
CALD1Q05682 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.64□□□□□ -1.51
CALD1Q05682 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CALD1Q05682 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.64□□□□□ -1.51
CALD1Q05682 AP002967.1-201ENST00000624203 539 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.64□□□□□ -1.51
CALD1Q05682 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CALD1Q05682 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CALD1Q05682 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CALD1Q05682 AC074029.4-201ENST00000624796 1859 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 AC007390.2-201ENST00000606229 3803 ntBASIC5.64□□□□□ -1.51
CALD1Q05682 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
CALD1Q05682 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CALD1Q05682 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CALD1Q05682 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CALD1Q05682 RNA5SP366-201ENST00000365454 123 ntBASIC5.63□□□□□ -1.51
CALD1Q05682 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALD1Q05682 CCNB2P1-201ENST00000399411 1150 ntBASIC5.63□□□□□ -1.51
CALD1Q05682 CR848007.2-201ENST00000424918 787 ntBASIC5.63□□□□□ -1.51
CALD1Q05682 AL157831.1-201ENST00000426134 473 ntBASIC5.63□□□□□ -1.51
CALD1Q05682 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.63□□□□□ -1.51
CALD1Q05682 AC073143.1-201ENST00000436316 395 ntBASIC5.63□□□□□ -1.51
CALD1Q05682 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.63□□□□□ -1.51
CALD1Q05682 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.63□□□□□ -1.51
CALD1Q05682 AC021205.1-201ENST00000468797 348 ntBASIC5.63□□□□□ -1.51
CALD1Q05682 HMGB1P3-201ENST00000502802 616 ntBASIC5.63□□□□□ -1.51
CALD1Q05682 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.63□□□□□ -1.51
CALD1Q05682 RNA5SP73-201ENST00000516744 108 ntBASIC5.63□□□□□ -1.51
CALD1Q05682 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms