Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC109458.1-201ENST00000508858 316 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 RNA5SP73-201ENST00000516744 108 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 OR5D15P-201ENST00000531671 942 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 AP001160.4-201ENST00000596971 382 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 ABI1P1-201ENST00000603375 1120 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 AL049539.1-201ENST00000611964 459 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 AC100827.5-201ENST00000615883 426 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 MIR7702-201ENST00000621931 59 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 C2orf27A-204ENST00000623058 969 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 CFTRP2-201ENST00000634304 199 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 FP325313.1-201ENST00000638228 703 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 MFSD8-220ENST00000641243 1422 ntBASIC3.26□□□□□ -1.89
HIST1H1AQ02539 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H1AQ02539 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 RNA5SP175-201ENST00000364275 119 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AL139128.1-201ENST00000413921 941 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 EIF1P3-201ENST00000423841 334 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC073069.1-201ENST00000428657 441 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC114495.1-201ENST00000441274 436 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 RPL35AP28-201ENST00000459730 331 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 RPL7P22-201ENST00000466005 733 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 IGLVIV-65-201ENST00000517313 360 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 OR5BC1P-201ENST00000529327 739 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 RN7SL690P-201ENST00000582087 240 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC023043.4-201ENST00000612081 449 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AC015922.4-201ENST00000612568 690 ntBASIC3.25□□□□□ -1.89
HIST1H1AQ02539 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H1AQ02539 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC233968.1-201ENST00000611212 1300 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 SNORD6-201ENST00000365444 73 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 SNORA70F-201ENST00000384142 135 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 MIR3065-201ENST00000390137 79 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC007394.1-201ENST00000421941 531 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 USP12PY-201ENST00000427677 1064 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 HMGB3P5-201ENST00000428894 612 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 USP9YP9-201ENST00000429406 715 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AL359265.2-201ENST00000434367 631 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AL356535.1-201ENST00000440335 398 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 YWHAQP9-201ENST00000445891 512 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC073264.2-201ENST00000448886 166 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 MTND2P28-201ENST00000457540 1044 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC007537.2-201ENST00000472093 511 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 STRADBP1-201ENST00000478954 1281 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC006517.1-201ENST00000480485 328 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HIST1H1AQ02539 RNA5SP143-201ENST00000516936 115 ntBASIC3.24□□□□□ -1.89
HIST1H1AQ02539 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms