Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MRPS35P3-201ENST00000603189 709 ntBASIC4.41□□□□□ -1.7
CBX1P83916 AP000255.1-201ENST00000610276 676 ntBASIC4.41□□□□□ -1.7
CBX1P83916 AC020763.5-201ENST00000623298 430 ntBASIC4.41□□□□□ -1.7
CBX1P83916 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.41□□□□□ -1.7
CBX1P83916 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.41□□□□□ -1.7
CBX1P83916 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CBX1P83916 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CBX1P83916 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.41□□□□□ -1.7
CBX1P83916 RIOK3P1-201ENST00000418778 1528 ntBASIC4.41□□□□□ -1.7
CBX1P83916 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
CBX1P83916 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CBX1P83916 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CBX1P83916 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CBX1P83916 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CBX1P83916 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
CBX1P83916 CHMP1B2P-201ENST00000399581 597 ntBASIC4.4□□□□□ -1.71
CBX1P83916 DUTP5-201ENST00000406790 469 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AP000534.2-201ENST00000412729 568 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AC073464.3-201ENST00000422564 712 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.4□□□□□ -1.71
CBX1P83916 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.4□□□□□ -1.71
CBX1P83916 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.4□□□□□ -1.71
CBX1P83916 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CBX1P83916 AC108463.1-201ENST00000450258 347 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AL136097.1-201ENST00000456945 913 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.4□□□□□ -1.71
CBX1P83916 AC023141.9-201ENST00000458734 412 ntBASIC4.4□□□□□ -1.71
CBX1P83916 RN7SL319P-201ENST00000480656 221 ntBASIC4.4□□□□□ -1.71
CBX1P83916 RPL7P47-201ENST00000497299 556 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AC106872.4-201ENST00000510050 523 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.4□□□□□ -1.71
CBX1P83916 RNA5SP362-201ENST00000516048 118 ntBASIC4.4□□□□□ -1.71
CBX1P83916 RNU6-751P-201ENST00000516382 101 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.4□□□□□ -1.71
CBX1P83916 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.4□□□□□ -1.71
CBX1P83916 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.4□□□□□ -1.71
CBX1P83916 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.4□□□□□ -1.71
CBX1P83916 MTATP6P25-201ENST00000574491 261 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AC012146.2-201ENST00000576545 416 ntBASIC4.4□□□□□ -1.71
CBX1P83916 MIR4310-201ENST00000582950 57 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.4□□□□□ -1.71
CBX1P83916 AC012557.1-201ENST00000607115 611 ntBASIC4.4□□□□□ -1.71
CBX1P83916 RNA5SP440-201ENST00000612665 119 ntBASIC4.4□□□□□ -1.71
CBX1P83916 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.4□□□□□ -1.71
CBX1P83916 AC011472.4-201ENST00000615848 491 ntBASIC4.4□□□□□ -1.71
CBX1P83916 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CBX1P83916 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CBX1P83916 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.4□□□□□ -1.71
CBX1P83916 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CBX1P83916 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CBX1P83916 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CBX1P83916 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CBX1P83916 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CBX1P83916 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CBX1P83916 AC021146.4-201ENST00000309229 279 ntBASIC4.39□□□□□ -1.71
CBX1P83916 RNA5SP183-201ENST00000362452 119 ntBASIC4.39□□□□□ -1.71
CBX1P83916 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CBX1P83916 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CBX1P83916 MIR143-201ENST00000385300 106 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.39□□□□□ -1.71
CBX1P83916 TXNP1-201ENST00000441872 371 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.39□□□□□ -1.71
CBX1P83916 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.39□□□□□ -1.71
CBX1P83916 SPRYD7P1-201ENST00000443861 570 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC144530.1-201ENST00000452862 555 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC018638.3-201ENST00000461273 132 ntBASIC4.39□□□□□ -1.71
CBX1P83916 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.39□□□□□ -1.71
CBX1P83916 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.39□□□□□ -1.71
CBX1P83916 RN7SL184P-201ENST00000488308 297 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC090543.1-201ENST00000492168 485 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC108693.1-201ENST00000496068 432 ntBASIC4.39□□□□□ -1.71
CBX1P83916 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CBX1P83916 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.39□□□□□ -1.71
CBX1P83916 HMGB1P3-201ENST00000502802 616 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.39□□□□□ -1.71
CBX1P83916 PDCL2P2-201ENST00000533651 189 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.39□□□□□ -1.71
CBX1P83916 AL049779.2-201ENST00000553847 315 ntBASIC4.39□□□□□ -1.71
CBX1P83916 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.39□□□□□ -1.71
CBX1P83916 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CBX1P83916 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CBX1P83916 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.39□□□□□ -1.71
CBX1P83916 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.39□□□□□ -1.71
CBX1P83916 AL133247.2-201ENST00000603236 482 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC016911.1-201ENST00000613297 452 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC139769.3-201ENST00000618383 175 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.39□□□□□ -1.71
CBX1P83916 MIR7702-201ENST00000621931 59 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC007342.8-201ENST00000623278 678 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.39□□□□□ -1.71
CBX1P83916 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CBX1P83916 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.39□□□□□ -1.71
CBX1P83916 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.39□□□□□ -1.71
CBX1P83916 LINC00622-201ENST00000562811 1570 ntBASIC4.39□□□□□ -1.71
CBX1P83916 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CBX1P83916 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.39□□□□□ -1.71
CBX1P83916 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CBX1P83916 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AP001486.2-201ENST00000561652 5113 ntBASIC4.39□□□□□ -1.71
CBX1P83916 AC096656.1-201ENST00000623826 1364 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms