Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNVU1-4-201ENST00000612985 164 ntBASIC2.68□□□□□ -1.98
RPL39P62891 MIR6862-1-201ENST00000613016 70 ntBASIC2.68□□□□□ -1.98
RPL39P62891 MIR6862-2-201ENST00000614755 70 ntBASIC2.68□□□□□ -1.98
RPL39P62891 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC2.68□□□□□ -1.98
RPL39P62891 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.68□□□□□ -1.98
RPL39P62891 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
RPL39P62891 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 LARP1BP1-201ENST00000506036 1359 ntBASIC2.67□□□□□ -1.98
RPL39P62891 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 RNU6-283P-201ENST00000364788 107 ntBASIC2.67□□□□□ -1.98
RPL39P62891 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RPL39P62891 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RPL39P62891 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 AC233289.1-201ENST00000403700 508 ntBASIC2.67□□□□□ -1.98
RPL39P62891 SNORA57.3-201ENST00000411095 141 ntBASIC2.67□□□□□ -1.98
RPL39P62891 IPMKP1-201ENST00000425988 855 ntBASIC2.67□□□□□ -1.98
RPL39P62891 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 HIGD1AP12-201ENST00000427832 281 ntBASIC2.67□□□□□ -1.98
RPL39P62891 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC2.67□□□□□ -1.98
RPL39P62891 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 TBCAP1-201ENST00000436520 327 ntBASIC2.67□□□□□ -1.98
RPL39P62891 AP000936.3-201ENST00000438127 255 ntBASIC2.67□□□□□ -1.98
RPL39P62891 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 Z95152.1-201ENST00000453556 656 ntBASIC2.67□□□□□ -1.98
RPL39P62891 AC013356.1-201ENST00000489027 564 ntBASIC2.67□□□□□ -1.98
RPL39P62891 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.67□□□□□ -1.98
RPL39P62891 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.67□□□□□ -1.98
RPL39P62891 AC008489.1-201ENST00000524271 483 ntBASIC2.67□□□□□ -1.98
RPL39P62891 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.67□□□□□ -1.98
RPL39P62891 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC2.67□□□□□ -1.98
RPL39P62891 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 PSMB7P1-201ENST00000556349 514 ntBASIC2.67□□□□□ -1.98
RPL39P62891 NPM1P47-201ENST00000560843 856 ntBASIC2.67□□□□□ -1.98
RPL39P62891 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 MIR4330-201ENST00000579077 105 ntBASIC2.67□□□□□ -1.98
RPL39P62891 MIR4738-201ENST00000579134 87 ntBASIC2.67□□□□□ -1.98
RPL39P62891 KLKP1-201ENST00000595979 403 ntBASIC2.67□□□□□ -1.98
RPL39P62891 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC2.67□□□□□ -1.98
RPL39P62891 AL592295.2-201ENST00000612578 206 ntBASIC2.67□□□□□ -1.98
RPL39P62891 MIR7703-201ENST00000620784 77 ntBASIC2.67□□□□□ -1.98
RPL39P62891 AC073530.2-201ENST00000623987 261 ntBASIC2.67□□□□□ -1.98
RPL39P62891 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.67□□□□□ -1.98
RPL39P62891 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.67□□□□□ -1.98
RPL39P62891 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.67□□□□□ -1.98
RPL39P62891 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
RPL39P62891 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPL39P62891 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC2.67□□□□□ -1.98
RPL39P62891 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC2.67□□□□□ -1.98
RPL39P62891 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.67□□□□□ -1.98
RPL39P62891 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RPL39P62891 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RPL39P62891 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RPL39P62891 IGKV7-3-201ENST00000357453 298 ntBASIC2.66□□□□□ -1.98
RPL39P62891 RNA5SP443-201ENST00000363083 132 ntBASIC2.66□□□□□ -1.98
RPL39P62891 RNA5SP366-201ENST00000365454 123 ntBASIC2.66□□□□□ -1.98
RPL39P62891 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.66□□□□□ -1.98
RPL39P62891 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RPL39P62891 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RPL39P62891 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RPL39P62891 MIR184-201ENST00000384962 84 ntBASIC2.66□□□□□ -1.98
RPL39P62891 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RPL39P62891 MIR550A3-201ENST00000390735 95 ntBASIC2.66□□□□□ -1.98
RPL39P62891 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC2.66□□□□□ -1.98
RPL39P62891 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.66□□□□□ -1.98
RPL39P62891 AC108032.1-201ENST00000416706 207 ntBASIC2.66□□□□□ -1.98
RPL39P62891 CBX1P1-201ENST00000440184 427 ntBASIC2.66□□□□□ -1.98
RPL39P62891 AL138878.2-201ENST00000440581 1241 ntBASIC2.66□□□□□ -1.98
RPL39P62891 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC2.66□□□□□ -1.98
RPL39P62891 TXNP2-201ENST00000443918 295 ntBASIC2.66□□□□□ -1.98
RPL39P62891 RPL21P11-201ENST00000461458 483 ntBASIC2.66□□□□□ -1.98
RPL39P62891 TSACC-207ENST00000470342 601 ntTSL 2 BASIC2.66□□□□□ -1.98
RPL39P62891 PPIAP15-201ENST00000479662 484 ntBASIC2.66□□□□□ -1.98
RPL39P62891 RPS3AP50-201ENST00000487064 803 ntBASIC2.66□□□□□ -1.98
RPL39P62891 NDUFA5P12-201ENST00000503796 343 ntBASIC2.66□□□□□ -1.98
RPL39P62891 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC2.66□□□□□ -1.98
RPL39P62891 AC106806.2-201ENST00000509365 500 ntBASIC2.66□□□□□ -1.98
RPL39P62891 RAC1P2-201ENST00000511164 579 ntBASIC2.66□□□□□ -1.98
RPL39P62891 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RPL39P62891 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC2.66□□□□□ -1.98
RPL39P62891 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.66□□□□□ -1.98
RPL39P62891 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC2.66□□□□□ -1.98
RPL39P62891 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC2.66□□□□□ -1.98
RPL39P62891 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC2.66□□□□□ -1.98
RPL39P62891 MIR4715-201ENST00000584117 79 ntBASIC2.66□□□□□ -1.98
RPL39P62891 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC2.66□□□□□ -1.98
RPL39P62891 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.66□□□□□ -1.98
RPL39P62891 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms