Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RPS23P7-201ENST00000466210 444 ntBASIC3.89□□□□□ -1.79
LMO4P61968 RN7SL385P-201ENST00000468873 276 ntBASIC3.89□□□□□ -1.79
LMO4P61968 RPL36AP41-201ENST00000493820 306 ntBASIC3.89□□□□□ -1.79
LMO4P61968 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO4P61968 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 AC118465.1-201ENST00000513820 1271 ntBASIC3.89□□□□□ -1.79
LMO4P61968 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO4P61968 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO4P61968 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO4P61968 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO4P61968 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.89□□□□□ -1.79
LMO4P61968 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO4P61968 AC125611.1-201ENST00000549563 229 ntBASIC3.89□□□□□ -1.79
LMO4P61968 FKBP1BP1-201ENST00000553366 325 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO4P61968 AC084783.1-201ENST00000565846 910 ntBASIC3.89□□□□□ -1.79
LMO4P61968 MIR4277-201ENST00000578298 84 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC069061.3-201ENST00000582254 823 ntBASIC3.89□□□□□ -1.79
LMO4P61968 CBX3P2-202ENST00000583365 535 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AL137072.1-201ENST00000603444 466 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC096553.1-201ENST00000605169 829 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AL356218.2-201ENST00000605264 187 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC073137.1-201ENST00000605636 634 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC021851.1-201ENST00000608537 1082 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC090116.1-201ENST00000615679 446 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AL731566.2-201ENST00000618971 317 ntBASIC3.89□□□□□ -1.79
LMO4P61968 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO4P61968 AL049536.1-201ENST00000625043 744 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 FRG1DP-201ENST00000635586 771 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LMO4P61968 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LMO4P61968 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 A2MP1-204ENST00000566278 4130 ntBASIC3.89□□□□□ -1.79
LMO4P61968 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 ZNF137P-201ENST00000456718 1920 ntBASIC3.89□□□□□ -1.79
LMO4P61968 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 AP000473.2-201ENST00000602659 1537 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC120338.1-201ENST00000625074 1541 ntBASIC3.89□□□□□ -1.79
LMO4P61968 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO4P61968 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO4P61968 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.88□□□□□ -1.79
LMO4P61968 STX3-208ENST00000641815 3236 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.88□□□□□ -1.79
LMO4P61968 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO4P61968 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO4P61968 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO4P61968 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO4P61968 RPL32P3-201ENST00000359025 275 ntBASIC3.88□□□□□ -1.79
LMO4P61968 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.88□□□□□ -1.79
LMO4P61968 AC234772.1-201ENST00000377927 937 ntBASIC3.88□□□□□ -1.79
LMO4P61968 SNORA5.1-201ENST00000384275 131 ntBASIC3.88□□□□□ -1.79
LMO4P61968 RNU6-906P-201ENST00000384700 70 ntBASIC3.88□□□□□ -1.79
LMO4P61968 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.88□□□□□ -1.79
LMO4P61968 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO4P61968 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.88□□□□□ -1.79
LMO4P61968 AC105402.1-201ENST00000413336 545 ntBASIC3.88□□□□□ -1.79
LMO4P61968 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.88□□□□□ -1.79
LMO4P61968 RPL22P18-201ENST00000417197 377 ntBASIC3.88□□□□□ -1.79
LMO4P61968 KRR1P1-201ENST00000419430 803 ntBASIC3.88□□□□□ -1.79
LMO4P61968 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AC048351.1-201ENST00000420064 602 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AL732292.1-201ENST00000426692 226 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.88□□□□□ -1.79
LMO4P61968 UBE2V1P1-201ENST00000430836 445 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.88□□□□□ -1.79
LMO4P61968 MTND4P32-201ENST00000437189 1237 ntBASIC3.88□□□□□ -1.79
LMO4P61968 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LMO4P61968 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.88□□□□□ -1.79
LMO4P61968 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.88□□□□□ -1.79
LMO4P61968 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AC004263.1-201ENST00000479327 332 ntBASIC3.88□□□□□ -1.79
LMO4P61968 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.88□□□□□ -1.79
LMO4P61968 AC013356.1-201ENST00000489027 564 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AC026979.1-201ENST00000492525 396 ntBASIC3.88□□□□□ -1.79
LMO4P61968 OR5H3P-201ENST00000502817 919 ntBASIC3.88□□□□□ -1.79
LMO4P61968 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.88□□□□□ -1.79
LMO4P61968 AC007016.1-201ENST00000512110 244 ntBASIC3.88□□□□□ -1.79
LMO4P61968 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.88□□□□□ -1.79
LMO4P61968 RNU6-1004P-201ENST00000516584 111 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.88□□□□□ -1.79
LMO4P61968 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LMO4P61968 AC004923.2-201ENST00000529649 369 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AP001781.1-201ENST00000530977 207 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.88□□□□□ -1.79
LMO4P61968 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.88□□□□□ -1.79
LMO4P61968 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.88□□□□□ -1.79
LMO4P61968 AL442163.2-201ENST00000553912 710 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.88□□□□□ -1.79
LMO4P61968 AC127024.5-201ENST00000580085 462 ntBASIC3.88□□□□□ -1.79
LMO4P61968 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.88□□□□□ -1.79
LMO4P61968 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.88□□□□□ -1.79
LMO4P61968 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms