Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.6□□□□□ -1.83
AP3S2P59780 AL138799.3-201ENST00000438968 350 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 YWHAZP2-201ENST00000440317 728 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 VN1R25P-201ENST00000443385 738 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.6□□□□□ -1.83
AP3S2P59780 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.6□□□□□ -1.83
AP3S2P59780 OR52J1P-201ENST00000450596 932 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 VN1R40P-201ENST00000455196 941 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 HMGB3P30-201ENST00000457863 606 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 RPL23AP62-201ENST00000463396 453 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 TMED11P-201ENST00000479478 690 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 AC092451.1-201ENST00000480211 153 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 AC109462.1-201ENST00000491087 368 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 RPS27AP16-201ENST00000492222 470 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 PFN1P8-201ENST00000497012 543 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 RPL7P47-201ENST00000497299 556 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 BTF3L4P4-201ENST00000506381 449 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.6□□□□□ -1.83
AP3S2P59780 SOX5P1-201ENST00000524155 1127 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.6□□□□□ -1.83
AP3S2P59780 OR5BC1P-201ENST00000529327 739 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 OR5D15P-201ENST00000531671 942 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 AP001880.2-201ENST00000538233 448 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.6□□□□□ -1.83
AP3S2P59780 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.6□□□□□ -1.83
AP3S2P59780 AC006270.2-201ENST00000578523 652 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.6□□□□□ -1.83
AP3S2P59780 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.6□□□□□ -1.83
AP3S2P59780 AC006116.3-201ENST00000592968 361 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.6□□□□□ -1.83
AP3S2P59780 AC079587.1-201ENST00000603846 277 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 AC012213.4-201ENST00000606457 354 ntBASIC3.6□□□□□ -1.83
AP3S2P59780 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.6□□□□□ -1.83
AP3S2P59780 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.6□□□□□ -1.83
AP3S2P59780 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP3S2P59780 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC3.6□□□□□ -1.83
AP3S2P59780 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.6□□□□□ -1.83
AP3S2P59780 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP3S2P59780 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
AP3S2P59780 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S2P59780 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S2P59780 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S2P59780 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S2P59780 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S2P59780 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
AP3S2P59780 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3S2P59780 MIR320B1-201ENST00000390209 79 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 AL031985.1-201ENST00000392713 418 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3S2P59780 AC119751.6-201ENST00000416712 186 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.59□□□□□ -1.83
AP3S2P59780 AP001324.1-201ENST00000428553 399 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 ELOCP6-201ENST00000429066 328 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.59□□□□□ -1.83
AP3S2P59780 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S2P59780 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.59□□□□□ -1.83
AP3S2P59780 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3S2P59780 DNAJC19P1-201ENST00000455312 319 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 ELOCP12-201ENST00000458706 328 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 AC023141.9-201ENST00000458734 412 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 RN7SL93P-201ENST00000463035 293 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 RN7SL738P-201ENST00000470264 297 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 AC007537.2-201ENST00000472093 511 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3S2P59780 RPL7AP6-201ENST00000477943 801 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 HPRT1P2-201ENST00000505250 544 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3S2P59780 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3S2P59780 MTCO1P30-201ENST00000515244 580 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 RNU6-319P-201ENST00000516025 108 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 RNA5SP473-201ENST00000516402 125 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
AP3S2P59780 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S2P59780 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.59□□□□□ -1.83
AP3S2P59780 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3S2P59780 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.59□□□□□ -1.83
AP3S2P59780 CCDC58P1-201ENST00000578567 430 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 NF1P5-201ENST00000588287 448 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3S2P59780 AL512782.1-201ENST00000603093 364 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 AC020910.2-201ENST00000603635 610 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 AC095038.2-201ENST00000621464 1070 ntBASIC3.59□□□□□ -1.83
AP3S2P59780 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.59□□□□□ -1.83
AP3S2P59780 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3S2P59780 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S2P59780 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
AP3S2P59780 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.59□□□□□ -1.83
AP3S2P59780 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
AP3S2P59780 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
AP3S2P59780 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
AP3S2P59780 BRAFP1-201ENST00000445336 2703 ntBASIC3.58□□□□□ -1.84
AP3S2P59780 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP3S2P59780 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP3S2P59780 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
AP3S2P59780 SNORA37-201ENST00000384504 129 ntBASIC3.58□□□□□ -1.84
AP3S2P59780 HMGN2P8-201ENST00000391458 268 ntBASIC3.58□□□□□ -1.84
AP3S2P59780 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP3S2P59780 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.58□□□□□ -1.84
AP3S2P59780 RPL31P45-201ENST00000419532 356 ntBASIC3.58□□□□□ -1.84
AP3S2P59780 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms