Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH4P55283 RPL7AP28-201ENST00000464513 571 ntBASIC4.4□□□□□ -1.71
CDH4P55283 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH4P55283 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CDH4P55283 RN7SL860P-201ENST00000473738 223 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC105137.1-201ENST00000484355 562 ntBASIC4.4□□□□□ -1.71
CDH4P55283 DEFB109F-201ENST00000491870 277 ntBASIC4.4□□□□□ -1.71
CDH4P55283 PPM1AP1-201ENST00000502740 1135 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC108475.1-201ENST00000507880 950 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC002456.2-201ENST00000509356 380 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC021146.7-201ENST00000509604 775 ntBASIC4.4□□□□□ -1.71
CDH4P55283 KCTD9P2-201ENST00000512203 1013 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC034244.2-201ENST00000514668 858 ntBASIC4.4□□□□□ -1.71
CDH4P55283 PHBP17-201ENST00000528576 541 ntBASIC4.4□□□□□ -1.71
CDH4P55283 TRAV11-201ENST00000539512 339 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC006064.5-201ENST00000541782 248 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH4P55283 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH4P55283 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH4P55283 RN7SL176P-201ENST00000580352 264 ntBASIC4.4□□□□□ -1.71
CDH4P55283 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH4P55283 AC010200.2-201ENST00000605098 235 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH4P55283 AC090948.2-201ENST00000607363 564 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AL391834.1-201ENST00000609609 560 ntBASIC4.4□□□□□ -1.71
CDH4P55283 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH4P55283 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH4P55283 AL445363.3-201ENST00000623080 671 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH4P55283 AC119674.1-212ENST00000641155 993 ntBASIC4.4□□□□□ -1.71
CDH4P55283 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH4P55283 AC074029.4-201ENST00000624796 1859 ntBASIC4.4□□□□□ -1.71
CDH4P55283 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CDH4P55283 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH4P55283 AC010329.2-201ENST00000595195 2737 ntBASIC4.4□□□□□ -1.71
CDH4P55283 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH4P55283 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH4P55283 MAPK10-304ENST00000641341 3984 ntBASIC4.39□□□□□ -1.71
CDH4P55283 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH4P55283 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH4P55283 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH4P55283 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CDH4P55283 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CDH4P55283 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
CDH4P55283 MIR383-201ENST00000362257 73 ntBASIC4.39□□□□□ -1.71
CDH4P55283 RNU1-94P-201ENST00000362627 173 ntBASIC4.39□□□□□ -1.71
CDH4P55283 RNU6-984P-201ENST00000363236 109 ntBASIC4.39□□□□□ -1.71
CDH4P55283 MIR320B1-201ENST00000390209 79 ntBASIC4.39□□□□□ -1.71
CDH4P55283 RNA5SP372-201ENST00000390836 115 ntBASIC4.39□□□□□ -1.71
CDH4P55283 AL049693.1-201ENST00000402760 611 ntBASIC4.39□□□□□ -1.71
CDH4P55283 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH4P55283 AC009237.10-201ENST00000414112 510 ntBASIC4.39□□□□□ -1.71
CDH4P55283 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.39□□□□□ -1.71
CDH4P55283 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH4P55283 MTCO3P21-201ENST00000430791 643 ntBASIC4.39□□□□□ -1.71
CDH4P55283 AC007563.3-201ENST00000433233 371 ntBASIC4.39□□□□□ -1.71
CDH4P55283 AC092013.1-201ENST00000438795 332 ntBASIC4.39□□□□□ -1.71
CDH4P55283 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH4P55283 NUTF2P3-201ENST00000448540 384 ntBASIC4.39□□□□□ -1.71
CDH4P55283 ABCF2P2-201ENST00000450549 296 ntBASIC4.39□□□□□ -1.71
CDH4P55283 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH4P55283 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH4P55283 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH4P55283 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.39□□□□□ -1.71
CDH4P55283 SNORA70.17-201ENST00000516449 133 ntBASIC4.39□□□□□ -1.71
CDH4P55283 RNA5SP519-201ENST00000516480 119 ntBASIC4.39□□□□□ -1.71
CDH4P55283 AP003730.1-201ENST00000524605 285 ntBASIC4.39□□□□□ -1.71
CDH4P55283 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH4P55283 TVP23BP1-201ENST00000557500 617 ntBASIC4.39□□□□□ -1.71
CDH4P55283 AC011477.5-201ENST00000586571 259 ntBASIC4.39□□□□□ -1.71
CDH4P55283 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH4P55283 ARF4P1-201ENST00000605447 541 ntBASIC4.39□□□□□ -1.71
CDH4P55283 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH4P55283 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH4P55283 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH4P55283 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH4P55283 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH4P55283 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH4P55283 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH4P55283 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.39□□□□□ -1.71
CDH4P55283 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH4P55283 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH4P55283 NOL8P1-201ENST00000508336 3529 ntBASIC4.38□□□□□ -1.71
CDH4P55283 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH4P55283 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH4P55283 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH4P55283 SNORA70.2-201ENST00000364506 135 ntBASIC4.38□□□□□ -1.71
CDH4P55283 AL161909.1-201ENST00000397390 712 ntBASIC4.38□□□□□ -1.71
CDH4P55283 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH4P55283 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH4P55283 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.38□□□□□ -1.71
CDH4P55283 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH4P55283 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH4P55283 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH4P55283 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH4P55283 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH4P55283 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH4P55283 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH4P55283 RNU6-1218P-201ENST00000458990 108 ntBASIC4.38□□□□□ -1.71
CDH4P55283 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms